fgenesh2_pg.scaffold_1639000001 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 fgenesh2_pg.scaffold_1639000001 T139231_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_1639000001 C2H2 ZF 3 26

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004730 Calypte anna Aan_R004730 N
Afo_R002166 Aptenodytes forsteri Afo_R002166 N
Alligator_sinensis_CCG012947.1 Alligator sinensis Alligator_sinensis_CCG012947.1 N
Brh_R013063 Buceros rhinoceros Brh_R013063 N
Cmyd_10018138 Chelonia mydas Cmyd_10018138 N
ENSACAG00000000987 Anolis carolinensis ENSACAG00000000987 N
ENSAMXG00000007536 Astyanax mexicanus ENSAMXG00000007536 N
ENSAPLG00000014933 Anas platyrhynchos ENSAPLG00000014933 N
npas2 Danio rerio ENSDARG00000016536 N
ENSFALG00000002784 Ficedula albicollis ENSFALG00000002784 N
npas2 Gasterosteus aculeatus ENSGACG00000020338 N
ENSGALG00000009063 Gallus gallus ENSGALG00000009063 N
ENSGMOG00000012332 Gadus morhua ENSGMOG00000012332 N
ENSLACG00000016260 Latimeria chalumnae ENSLACG00000016260 N
ENSLOCG00000014750 Lepisosteus oculatus ENSLOCG00000014750 N
ENSMGAG00000008030 Meleagris gallopavo ENSMGAG00000008030 N
ENSOANG00000011640 Ornithorhynchus anatinus ENSOANG00000011640 N
ENSONIG00000004466 Oreochromis niloticus ENSONIG00000004466 N
ENSPFOG00000019432 Poecilia formosa ENSPFOG00000019432 N
ENSPSIG00000016231 Pelodiscus sinensis ENSPSIG00000016231 N
ENSTGUG00000004465 Taeniopygia guttata ENSTGUG00000004465 N
npas2 Tetraodon nigroviridis ENSTNIG00000011822 N
npas2 Takifugu rubripes ENSTRUG00000013269 N
ENSXMAG00000012189 Xiphophorus maculatus ENSXMAG00000012189 N
Gfo_R003435 Geospiza fortis Gfo_R003435 N
Ogr07495 Ophisaurus gracilis Ogr07495 N
Pvit_15200 Pogona vitticeps Pvit_15200 N
Tal_R013206 Tyto alba Tal_R013206 N
XP_002934591 Xenopus tropicalis XP_002934591 N