CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.5.564.1
(
Mycosphaerella fijiensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw1.5.564.1
T140084_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.5.564.1
C2H2 ZF
42
66
YTCDVPDCGKAFYQKTHLEIHTRAH
gw1.5.564.1
C2H2 ZF
72
96
FLCKEPSCGQRFSQLGNLKTHERRH
gw1.5.564.1
C2H2 ZF
102
124
YHCDICGKTFAQHGNVRAHKIVH
gw1.5.564.1
C2H2 ZF
130
155
FTCKLDNCNKQFTQLGNLKSHQNKFH
Links
Other
C2H2 ZF
family TFs
Other
Mycosphaerella fijiensis
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_036870
Albugo laibachii
ALNC14_036870
N
0.000
F443_05618
Phytophthora parasitica
F443_05618
N
0.000
fgenesh_scip_prom.28083.9880
Phytophthora lateralis
fgenesh_scip_prom.28083.9880
N
0.000
fgenesh_scip_prom.46568.10844
Phytophthora kernoviae
fgenesh_scip_prom.46568.10844
N
0.000
maker-pag1_scaffold_104-snap-gene-0.37
Pythium aphanidermatum
maker-pag1_scaffold_104-snap-gene-0.37
N
0.000
maker-par_contig_359-snap-gene-0.8
Pythium arrhenomanes
maker-par_contig_359-snap-gene-0.8
N
0.000
maker-pir_contig_315-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_315-fgenesh-gene-0.0
N
0.000
maker-piw_contig_348-snap-gene-0.7
Pythium iwayamai
maker-piw_contig_348-snap-gene-0.7
N
0.000
maker-pve_contig_589-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_589-fgenesh-gene-0.0
N
0.000
Phyra74345
Phytophthora ramorum
Phyra74345
N
0.000
Phyra84059
Phytophthora ramorum
Phyra84059
N
0.000
Physo127312
Phytophthora sojae
Physo127312
N
0.000
PITG_01135
Phytophthora infestans
PITG_01135
N
0.000
PYU1_G001938
Pythium ultimum
PYU1_G001938
N
0.000
SPRG_07347
Saprolegnia parasitica
SPRG_07347
N
0.000