CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22008793m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22008793m.g
T140711_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22008793m.p
C2H2 ZF
90
112
YQCIICDKTFFDSSNLTKHKRIH
Ocbimv22008793m.p
C2H2 ZF
118
140
YHCDICGRAFSQQGHLTTHKYTH
Ocbimv22008793m.p
C2H2 ZF
146
168
YHCDICGKRFSQSDKLILHKRTH
Ocbimv22008793m.p
C2H2 ZF
174
196
YQCGICAKTFSRRSYLKRHKYIH
Ocbimv22008793m.p
C2H2 ZF
202
224
YSCDVCGKTFSQRGNMTVHKRTH
Ocbimv22008793m.p
C2H2 ZF
230
252
YHCDICEKTFSEYNKLTRHKQVH
Ocbimv22008793m.p
C2H2 ZF
258
280
YHCDVCRKTFSESTGLTRHIRMH
Ocbimv22008793m.p
C2H2 ZF
286
308
YHCDICGKTFSQNGHLTQHVRIH
Ocbimv22008793m.p
C2H2 ZF
314
336
YHCHICSKTFSQRGHLKLHVRGH
Ocbimv22008793m.p
C2H2 ZF
342
364
FSCDICGKAYADNQSLTRHKPVH
Ocbimv22008794m.p
C2H2 ZF
90
112
YQCIICDKTFFDSSNLTKHKRIH
Ocbimv22008794m.p
C2H2 ZF
118
140
YHCDICGRAFSQQGHLTTHKYTH
Ocbimv22008794m.p
C2H2 ZF
146
168
YHCDICGKRFSQSDKLILHKRTH
Ocbimv22008794m.p
C2H2 ZF
174
196
YQCGICAKTFSRRSYLKRHKYIH
Ocbimv22008794m.p
C2H2 ZF
202
224
YSCDVCGKTFSQRGNMTVHKRTH
Ocbimv22008794m.p
C2H2 ZF
230
252
YHCDICEKTFSEYNKLTRHKQVH
Ocbimv22008794m.p
C2H2 ZF
258
280
YHCDVCRKTFSESTGLTRHIRMH
Ocbimv22008794m.p
C2H2 ZF
286
308
YHCDICGKTFSQNGHLTQHVRIH
Ocbimv22008794m.p
C2H2 ZF
314
336
YHCHICSKTFSQRGHLKLHVRGH
Ocbimv22008794m.p
C2H2 ZF
342
364
FSCDICGKAYADNQSLTRHKPVH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAS_chr2-1_0445
Komagataella pastoris
PAS_chr2-1_0445
N
XP_002491352.1
Pichia pastoris
XP_002491352.1
N