CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22015638m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22015638m.g
T141003_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22015638m.p
C2H2 ZF
23
45
HSCDICGKGFTRYDNLERHRLSH
Ocbimv22015638m.p
C2H2 ZF
51
73
FRCDTCGKSFSQKSHLKQHKVIH
Ocbimv22015638m.p
C2H2 ZF
79
101
FKCHLCGSAFSQNGNLTRHMKTH
Ocbimv22015638m.p
C2H2 ZF
133
155
FKCNVCGAAFSRNGDLTRHFRTH
Ocbimv22015638m.p
C2H2 ZF
246
268
YRCELCGKAFAENSYLTRHKRAH
Ocbimv22015638m.p
C2H2 ZF
274
296
FNCEVCNKSFSQKSHLKVHHRIH
Ocbimv22015638m.p
C2H2 ZF
302
323
FRCGLCGYAFARKDHLERHQRN
Ocbimv22015639m.p
C2H2 ZF
23
45
HSCDICGKGFTRYDNLERHRLSH
Ocbimv22015639m.p
C2H2 ZF
51
73
FRCDTCGKSFSQKSHLKQHKVIH
Ocbimv22015639m.p
C2H2 ZF
79
101
FKCHLCGSAFSQNGNLTRHMKTH
Ocbimv22015639m.p
C2H2 ZF
133
155
FKCNVCGAAFSRNGDLTRHFRTH
Ocbimv22015639m.p
C2H2 ZF
246
268
YRCELCGKAFAENSYLTRHKRAH
Ocbimv22015639m.p
C2H2 ZF
274
296
FNCEVCNKSFSQKSHLKVHHRIH
Ocbimv22015639m.p
C2H2 ZF
302
323
FRCGLCGYAFARKDHLERHQRN
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOTRDRAFT_45377
Gloeophyllum trabeum
GLOTRDRAFT_45377
N
gww2.4.45.1
Phanerochaete chrysosporium
gww2.4.45.1
N
JAAARDRAFT_32765
Jaapia argillacea
JAAARDRAFT_32765
N
PHLGIDRAFT_125267
Phlebiopsis gigantea
PHLGIDRAFT_125267
N