CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30016822m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30016822m.g
T142295_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23958267_peptide
C2H2 ZF
404
426
WPCFECPKKFRSSELLQKHLATH
23958267_peptide
C2H2 ZF
469
491
FSCNICAKMFPRAYSLQRHLVMH
23958267_peptide
C2H2 ZF
497
519
YTCPICEKKFSHVYNRTRHVRRH
23958267_peptide
C2H2 ZF
551
573
WACSQCDLEFENASLLNLHMLTH
23958267_peptide
C2H2 ZF
671
693
LKCPDCDDIFDDKKDLAIHATAH
23958267_peptide
C2H2 ZF
713
735
YHCNMCNKPFRERVKYERHMELH
23958267_peptide
C2H2 ZF
743
765
IQCEICNKRFLNNSAIACHMKTH
23958267_peptide
C2H2 ZF
771
793
YRCPFCDEGFDRTDSLKEHVIVH
23958267_peptide
C2H2 ZF
799
822
FHCPHCSKTFTEYPQVRKHIRGFH
23958267_peptide
C2H2 ZF
827
849
YPCPECEKVFPRPDKLKLHMLRH
23958267_peptide
C2H2 ZF
855
878
FLCANCGKQFKRKDKLKEHMLRMH
23958267_peptide
C2H2 ZF
912
935
FKCRICLIGFRRRGMLVNHLAKRH
23958267_peptide
C2H2 ZF
957
980
YFCNYCEKVYKSSSKRKIHILKNH
23958267_peptide
C2H2 ZF
1016
1039
FACAHCPRQYSSKAKMMDHVRKKH
23958268_peptide
C2H2 ZF
404
426
WPCFECPKKFRSSELLQKHLATH
23958268_peptide
C2H2 ZF
469
491
FSCNICAKMFPRAYSLQRHLVMH
23958268_peptide
C2H2 ZF
497
519
YTCPICEKKFSHVYNRTRHVRRH
23958268_peptide
C2H2 ZF
551
573
WACSQCDLEFENASLLNLHMLTH
23958268_peptide
C2H2 ZF
671
693
LKCPDCDDIFDDKKDLAIHATAH
23958268_peptide
C2H2 ZF
713
735
YHCNMCNKPFRERVKYERHMELH
23958268_peptide
C2H2 ZF
743
765
IQCEICNKRFLNNSAIACHMKTH
23958268_peptide
C2H2 ZF
771
793
YRCPFCDEGFDRTDSLKEHVIVH
23958268_peptide
C2H2 ZF
799
822
FHCPHCSKTFTEYPQVRKHIRGFH
23958268_peptide
C2H2 ZF
827
849
YPCPECEKVFPRPDKLKLHMLRH
23958268_peptide
C2H2 ZF
855
878
FLCANCGKQFKRKDKLKEHMLRMH
23958268_peptide
C2H2 ZF
912
935
FKCRICLIGFRRRGMLVNHLAKRH
23958268_peptide
C2H2 ZF
957
980
YFCNYCEKVYKSSSKRKIHILKNH
23958268_peptide
C2H2 ZF
1016
1039
FACAHCPRQYSSKAKMMDHVRKKH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action