CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30031849m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30031849m.g
T142408_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23949906_peptide
C2H2 ZF
207
229
YKCDSCPKSFNWKSNLIRHQVTH
23949906_peptide
C2H2 ZF
235
258
FNCENCDKIFTDPSNLQRHIRTQH
23949906_peptide
C2H2 ZF
264
286
HACPECGKTFATSSGLKQHTHIH
23949906_peptide
C2H2 ZF
292
314
FTCEVCYKSYTQFSNLCRHKRMH
23949906_peptide
C2H2 ZF
321
342
IKCSGCNQVFSTVTSLNKHRRF
23949906_peptide
C2H2 ZF
819
841
YTCKFCGKIFPRSANLTRHLRTH
23949906_peptide
C2H2 ZF
847
870
YSCKYCDRSFSISSNLQRHVRNIH
23949906_peptide
C2H2 ZF
876
898
FKCPMCDRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10005698
Crassostrea gigas
CGI_10005698
N
0.779
ISCW010781
Ixodes scapularis
ISCW010781
N
0.775
SMAR011141
Strigamia maritima
SMAR011141
N
0.785