Pavir.Ea03512 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Ea03512 T143343_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03512.1.p C2H2 ZF 1221 1244
Pavir.Ea03512.1.p C2H2 ZF 1245 1268
Pavir.Ea03512.1.p C2H2 ZF 1274 1298
Pavir.Ea03512.1.p C2H2 ZF 1304 1330
Pavir.Ea03512.2.p C2H2 ZF 1211 1234
Pavir.Ea03512.2.p C2H2 ZF 1235 1258
Pavir.Ea03512.2.p C2H2 ZF 1264 1288
Pavir.Ea03512.2.p C2H2 ZF 1294 1320

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_175940 Agaricus bisporus AGABI2DRAFT_175940 N
BOTBODRAFT_37928 Botryobasidium botryosum BOTBODRAFT_37928 N
CERSUDRAFT_42528 Ceriporiopsis subvermispora CERSUDRAFT_42528 N
CY34DRAFT_798859 Suillus luteus CY34DRAFT_798859 N
estExt_Genewise1Plus.C_11260 Heterobasidion annosum estExt_Genewise1Plus.C_11260 N
fgenesh1_pg.C_scaffold_11000407 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000407 N
FIBRA_04047 Fibroporia radiculosa FIBRA_04047 N
FOMPIDRAFT_125581 Fomitopsis pinicola FOMPIDRAFT_125581 N
GALMADRAFT_233562 Galerina marginata GALMADRAFT_233562 N
GLOTRDRAFT_68769 Gloeophyllum trabeum GLOTRDRAFT_68769 N
HETIRDRAFT_378035 Heterobasidion irregulare HETIRDRAFT_378035 N
JAAARDRAFT_203134 Jaapia argillacea JAAARDRAFT_203134 N
K443DRAFT_129546 Laccaria amethystina K443DRAFT_129546 N
LACBIDRAFT_291485 Laccaria bicolor LACBIDRAFT_291485 N
M378DRAFT_491257 Amanita muscaria M378DRAFT_491257 N
M404DRAFT_343922 Pisolithus tinctorius M404DRAFT_343922 N
M413DRAFT_62612 Hebeloma cylindrosporum M413DRAFT_62612 N
Moror_13254 Moniliophthora roreri Moror_13254 N
PAXRUDRAFT_828087 Paxillus rubicundulus PAXRUDRAFT_828087 N
PHACADRAFT_247347 Phanerochaete carnosa PHACADRAFT_247347 N
PHLGIDRAFT_124398 Phlebiopsis gigantea PHLGIDRAFT_124398 N
PILCRDRAFT_66498 Piloderma croceum PILCRDRAFT_66498 N
PISMIDRAFT_91000 Pisolithus microcarpus PISMIDRAFT_91000 N
PLEOSDRAFT_1092294 Pleurotus ostreatus PLEOSDRAFT_1092294 N
POSPLDRAFT_95382 Postia placenta POSPLDRAFT_95382 N
SCLCIDRAFT_14549 Scleroderma citrinum SCLCIDRAFT_14549 N
SERLA73DRAFT_176033 Serpula lacrymans SERLA73DRAFT_176033 N
V565_023640 Rhizoctonia solani V565_023640 N