Pavir.J16973 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.J16973 T143419_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J16973.1.p C2H2 ZF 96 118
Pavir.J16973.1.p C2H2 ZF 156 178

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002359 Aedes aegypti AAEL002359 I 0.000
AALB006352 Anopheles albimanus AALB006352 I 0.000
Aan_R013905 Calypte anna Aan_R013905 I 0.000
AARA001117 Anopheles arabiensis AARA001117 I 0.000
AATE002650 Anopheles atroparvus AATE002650 I 0.000
ACHR009241 Anopheles christyi ACHR009241 I 0.000
ACYPI000169 Acyrthosiphon pisum ACYPI000169 I 0.000
ADAC006269 Anopheles darlingi ADAC006269 I 0.000
ADIR000966 Anopheles dirus ADIR000966 I 0.000
AEPI005805 Anopheles epiroticus AEPI005805 I 0.000
AFAF021018 Anopheles farauti AFAF021018 I 0.000
Afo_R000100 Aptenodytes forsteri Afo_R000100 I 0.000
AFUN011577 Anopheles funestus AFUN011577 I 0.000
AGAP000061 Anopheles gambiae AGAP000061 I 0.000
Alligator_sinensis_CCG019829.1 Alligator sinensis Alligator_sinensis_CCG019829.1 I 0.000
AMEC018792 Anopheles melas AMEC018792 I 0.000
AMEM014370 Anopheles merus AMEM014370 I 0.000
AMIN002125 Anopheles minimus AMIN002125 I 0.000
ASIM_0001287801 Anisakis simplex ASIM_0001287801 I 0.000
ASIS013617 Anopheles sinensis ASIS013617 I 0.000
ASTEI06198 Anopheles stephensi ASTEI06198 I 0.000
ASU_11536 Ascaris suum ASU_11536 I 0.000
A_00240 Schistosoma haematobium A_00240 I 0.000
BXY_0786500 Bursaphelenchus xylophilus BXY_0786500 I 0.000
CapteG52697 Capitella teleta CapteG52697 I 0.000
CBG05700 Caenorhabditis briggsae CBG05700 I 0.000
CBN28920 Caenorhabditis brenneri CBN28920 I 0.000
CGI_10019668 Crassostrea gigas CGI_10019668 I 0.000
CJA05277 Caenorhabditis japonica CJA05277 I 0.000
Cmyd_10007600 Chelonia mydas Cmyd_10007600 I 0.000
CPIJ006386 Culex quinquefasciatus CPIJ006386 I 0.000
CpipJ_CPIJ006386 Culex pipiens CpipJ_CPIJ006386 I 0.000
CRE22230 Caenorhabditis remanei CRE22230 I 0.000
CRE24704 Caenorhabditis remanei CRE24704 I 0.000
csin107314 Clonorchis sinensis csin107314 I 0.000
csin111721 Clonorchis sinensis csin111721 I 0.000
D915_15034 Fasciola hepatica D915_15034 I 0.000
DAPPUDRAFT_32500 Daphnia pulex DAPPUDRAFT_32500 I 0.000
DICVIV_04514 Dictyocaulus viviparus DICVIV_04514 I 0.000
DILT_0001350901 Diphyllobothrium latum DILT_0001350901 I 0.000
ECANG7_03058 Echinococcus canadensis ECANG7_03058 I 0.000
ECANG7_03124 Echinococcus canadensis ECANG7_03124 I 0.000
EmuJ_001065200 Echinococcus multilocularis EmuJ_001065200 I 0.000
EmuJ_001091200 Echinococcus multilocularis EmuJ_001091200 I 0.000
ONECUT2 Anolis carolinensis ENSACAG00000009410 I 0.000
ENSACAG00000027024 Anolis carolinensis ENSACAG00000027024 I 0.000
ENSAMEG00000007428 Ailuropoda melanoleuca ENSAMEG00000007428 I 0.000
ENSAMEG00000014809 Ailuropoda melanoleuca ENSAMEG00000014809 I 0.000
ENSAMXG00000006507 Astyanax mexicanus ENSAMXG00000006507 I 0.000
ENSAMXG00000015765 Astyanax mexicanus ENSAMXG00000015765 I 0.000
ENSAMXG00000018796 Astyanax mexicanus ENSAMXG00000018796 I 0.000
ENSAMXG00000021213 Astyanax mexicanus ENSAMXG00000021213 I 0.000
ENSAPLG00000009150 Anas platyrhynchos ENSAPLG00000009150 I 0.000
ONECUT2 Bos taurus ENSBTAG00000022819 I 0.000
ONECUT1 Bos taurus ENSBTAG00000046470 I 0.000
ENSBTAG00000047578 Bos taurus ENSBTAG00000047578 I 0.000
ENSCAFG00000000127 Canis familiaris ENSCAFG00000000127 I 0.000
ONECUT1 Canis familiaris ENSCAFG00000015867 I 0.000
ONECUT1 Choloepus hoffmanni ENSCHOG00000004441 I 0.000
ONECUT1 Callithrix jacchus ENSCJAG00000000848 I 0.000
ONECUT2 Callithrix jacchus ENSCJAG00000003908 I 0.000
ONECUT2 Cavia porcellus ENSCPOG00000000055 I 0.000
ONECUT1 Cavia porcellus ENSCPOG00000026341 I 0.000
ENSCSAG00000011546 Chlorocebus sabaeus ENSCSAG00000011546 I 0.000
ENSCSAG00000011954 Chlorocebus sabaeus ENSCSAG00000011954 I 0.000
ENSCSAG00000018149 Chlorocebus sabaeus ENSCSAG00000018149 I 0.000
ENSCSAVG00000000071 Ciona savignyi ENSCSAVG00000000071 I 0.000
onecut1 Danio rerio ENSDARG00000007982 I 0.000
onecutl Danio rerio ENSDARG00000040253 I 0.000
onecut3a Danio rerio ENSDARG00000056395 I 0.000
onecut2 Danio rerio ENSDARG00000090387 I 0.000
onecut3b Danio rerio ENSDARG00000091059 I 0.000
ONECUT1 Dasypus novemcinctus ENSDNOG00000037207 I 0.000
ONECUT2 Dasypus novemcinctus ENSDNOG00000041725 I 0.000
Onecut2 Dipodomys ordii ENSDORG00000008672 I 0.000
ONECUT2 Equus caballus ENSECAG00000011345 I 0.000
ONECUT1 Equus caballus ENSECAG00000011997 I 0.000
ONECUT1 Erinaceus europaeus ENSEEUG00000010121 I 0.000
ONECUT1 Echinops telfairi ENSETEG00000013665 I 0.000
ENSFALG00000011399 Ficedula albicollis ENSFALG00000011399 I 0.000
ENSFALG00000011678 Ficedula albicollis ENSFALG00000011678 I 0.000
ENSFALG00000011940 Ficedula albicollis ENSFALG00000011940 I 0.000
ONECUT1 Felis catus ENSFCAG00000004348 I 0.000
ONECUT2 Felis catus ENSFCAG00000010819 I 0.000
ONECUT2 Homo sapiens ENSG00000119547 D 0.000
ONECUT1 Homo sapiens ENSG00000169856 D 0.000
ONECUT3 Homo sapiens ENSG00000205922 D 0.000
onecut3a Gasterosteus aculeatus ENSGACG00000012671 I 0.000
onecutl Gasterosteus aculeatus ENSGACG00000013501 I 0.000
onecut3b Gasterosteus aculeatus ENSGACG00000015272 I 0.000
onecut1 Gasterosteus aculeatus ENSGACG00000016525 I 0.000
ENSGALG00000027116 Gallus gallus ENSGALG00000027116 I 0.000
ONECUT3 Gallus gallus ENSGALG00000028081 I 0.000
ONECUT1 Gorilla gorilla ENSGGOG00000004682 I 0.000
ONECUT3 Gorilla gorilla ENSGGOG00000008983 I 0.000
ENSGGOG00000024651 Gorilla gorilla ENSGGOG00000024651 I 0.000
ENSGMOG00000005103 Gadus morhua ENSGMOG00000005103 I 0.000
ENSGMOG00000008893 Gadus morhua ENSGMOG00000008893 I 0.000
ENSGMOG00000012200 Gadus morhua ENSGMOG00000012200 I 0.000
ENSGMOG00000015844 Gadus morhua ENSGMOG00000015844 I 0.000
ENSLACG00000011596 Latimeria chalumnae ENSLACG00000011596 I 0.000
ENSLACG00000016574 Latimeria chalumnae ENSLACG00000016574 I 0.000
ENSLACG00000017269 Latimeria chalumnae ENSLACG00000017269 I 0.000
ENSLAFG00000028906 Loxodonta africana ENSLAFG00000028906 I 0.000
ENSLAFG00000032649 Loxodonta africana ENSLAFG00000032649 I 0.000
ENSLOCG00000003635 Lepisosteus oculatus ENSLOCG00000003635 I 0.000
ENSLOCG00000005935 Lepisosteus oculatus ENSLOCG00000005935 I 0.000
ENSLOCG00000007915 Lepisosteus oculatus ENSLOCG00000007915 I 0.000
ENSLOCG00000013415 Lepisosteus oculatus ENSLOCG00000013415 I 0.000
ENSMEUG00000005927 Macropus eugenii ENSMEUG00000005927 I 0.000
ENSMEUG00000006636 Macropus eugenii ENSMEUG00000006636 I 0.000
ONECUT2 Microcebus murinus ENSMICG00000003067 I 0.000
ENSMICG00000016488 Microcebus murinus ENSMICG00000016488 I 0.000
ONECUT2 Myotis lucifugus ENSMLUG00000005062 I 0.000
ONECUT1 Myotis lucifugus ENSMLUG00000012808 I 0.000
ONECUT1 Macaca mulatta ENSMMUG00000001425 I 0.000
ONECUT2 Macaca mulatta ENSMMUG00000023218 I 0.000
ONECUT1 Monodelphis domestica ENSMODG00000001801 I 0.000
ONECUT3 Monodelphis domestica ENSMODG00000004149 I 0.000
ONECUT2 Monodelphis domestica ENSMODG00000020448 I 0.000
ENSMPUG00000007536 Mustela putorius furo ENSMPUG00000007536 I 0.000
ENSMPUG00000016468 Mustela putorius furo ENSMPUG00000016468 I 0.000
Onecut1 Mus musculus ENSMUSG00000043013 D 0.000
Onecut3 Mus musculus ENSMUSG00000045518 I 0.000
Onecut2 Mus musculus ENSMUSG00000045991 I 0.000
ENSNLEG00000006563 Nomascus leucogenys ENSNLEG00000006563 I 0.000
ONECUT2 Ornithorhynchus anatinus ENSOANG00000001715 I 0.000
ENSOARG00000005150 Ovis aries ENSOARG00000005150 I 0.000
ENSOARG00000020928 Ovis aries ENSOARG00000020928 I 0.000
ONECUT1 Oryctolagus cuniculus ENSOCUG00000003312 I 0.000
ENSOCUG00000021525 Oryctolagus cuniculus ENSOCUG00000021525 I 0.000
ONECUT1 Otolemur garnettii ENSOGAG00000003851 I 0.000
ONECUT3 Otolemur garnettii ENSOGAG00000030667 I 0.000
ONECUT2 Otolemur garnettii ENSOGAG00000031961 I 0.000
ENSONIG00000002661 Oreochromis niloticus ENSONIG00000002661 I 0.000
ENSONIG00000004792 Oreochromis niloticus ENSONIG00000004792 I 0.000
ENSONIG00000006669 Oreochromis niloticus ENSONIG00000006669 I 0.000
ENSONIG00000012694 Oreochromis niloticus ENSONIG00000012694 I 0.000
ENSOPRG00000007398 Ochotona princeps ENSOPRG00000007398 I 0.000
ONECUT1 Ochotona princeps ENSOPRG00000010350 I 0.000
onecut3a Oryzias latipes ENSORLG00000004983 I 0.000
onecut1 Oryzias latipes ENSORLG00000012932 I 0.000
onecut3b Oryzias latipes ENSORLG00000015269 I 0.000
onecutl Oryzias latipes ENSORLG00000015739 I 0.000
ENSP00000262095 Macaca fascicularis ENSP00000262095 I 0.000
ENSP00000262095-D2 Bos grunniens ENSP00000262095-D2 I 0.000
ENSP00000302630 Macaca fascicularis ENSP00000302630 I 0.000
ENSP00000302630-D1 Bos grunniens ENSP00000302630-D1 I 0.000
ENSPANG00000004658 Papio anubis ENSPANG00000004658 I 0.000
ENSPANG00000017410 Papio anubis ENSPANG00000017410 I 0.000
ONECUT1 Procavia capensis ENSPCAG00000001517 I 0.000
ENSPFOG00000001415 Poecilia formosa ENSPFOG00000001415 I 0.000
ENSPFOG00000007991 Poecilia formosa ENSPFOG00000007991 I 0.000
ENSPFOG00000015971 Poecilia formosa ENSPFOG00000015971 I 0.000
ENSPFOG00000016688 Poecilia formosa ENSPFOG00000016688 I 0.000
ENSPFOG00000018925 Poecilia formosa ENSPFOG00000018925 I 0.000
ENSPPYG00000006489 Pongo abelii ENSPPYG00000006489 I 0.000
ENSPPYG00000009181 Pongo abelii ENSPPYG00000009181 I 0.000
ENSPSIG00000009063 Pelodiscus sinensis ENSPSIG00000009063 I 0.000
ENSPSIG00000011208 Pelodiscus sinensis ENSPSIG00000011208 I 0.000
ENSPSIG00000013194 Pelodiscus sinensis ENSPSIG00000013194 I 0.000
ONECUT1 Pan troglodytes ENSPTRG00000007090 I 0.000
ONECUT2 Pan troglodytes ENSPTRG00000010044 I 0.000
ONECUT2 Pteropus vampyrus ENSPVAG00000015740 I 0.000
Onecut1 Rattus norvegicus ENSRNOG00000008095 I 0.000
Onecut2 Rattus norvegicus ENSRNOG00000052665 I 0.000
ENSSARG00000013454 Sorex araneus ENSSARG00000013454 I 0.000
ENSSHAG00000018039 Sarcophilus harrisii ENSSHAG00000018039 I 0.000
ENSSHAG00000018152 Sarcophilus harrisii ENSSHAG00000018152 I 0.000
ONECUT1 Sus scrofa ENSSSCG00000004616 I 0.000
ONECUT3 Sus scrofa ENSSSCG00000013439 I 0.000
ENSSTOG00000020775 Ictidomys tridecemlineatus ENSSTOG00000020775 I 0.000
ENSSTOG00000027380 Ictidomys tridecemlineatus ENSSTOG00000027380 I 0.000
ENSSTOG00000028083 Ictidomys tridecemlineatus ENSSTOG00000028083 I 0.000
ENSTBEG00000014999 Tupaia belangeri ENSTBEG00000014999 I 0.000
ENSTBEG00000016693 Tupaia belangeri ENSTBEG00000016693 I 0.000
ONECUT3 Taeniopygia guttata ENSTGUG00000000213 I 0.000
ONECUT1 Taeniopygia guttata ENSTGUG00000006638 I 0.000
ONECUT2 Taeniopygia guttata ENSTGUG00000017501 I 0.000
onecut1 Tetraodon nigroviridis ENSTNIG00000011370 I 0.000
onecut3b Tetraodon nigroviridis ENSTNIG00000015320 I 0.000
onecutl Tetraodon nigroviridis ENSTNIG00000019595 I 0.000
onecutl Takifugu rubripes ENSTRUG00000000664 I 0.000
onecut2 Takifugu rubripes ENSTRUG00000000677 I 0.000
onecut3b Takifugu rubripes ENSTRUG00000008911 I 0.000
onecut3a Takifugu rubripes ENSTRUG00000017862 I 0.000
ENSTSYG00000007343 Tarsius syrichta ENSTSYG00000007343 I 0.000
ONECUT2 Tursiops truncatus ENSTTRG00000012956 I 0.000
ONECUT1 Tursiops truncatus ENSTTRG00000013376 I 0.000
ONECUT1 Vicugna pacos ENSVPAG00000005723 I 0.000
ENSXMAG00000001618 Xiphophorus maculatus ENSXMAG00000001618 I 0.000
ENSXMAG00000008993 Xiphophorus maculatus ENSXMAG00000008993 I 0.000
ENSXMAG00000012769 Xiphophorus maculatus ENSXMAG00000012769 I 0.000
ENSXMAG00000018128 Xiphophorus maculatus ENSXMAG00000018128 I 0.000
onecut Drosophila melanogaster FBgn0028996 D 0.000
GA15133 Drosophila pseudoobscura FBgn0075158 I 0.000
GF15916 Drosophila ananassae FBgn0092939 I 0.000
GF20615 Drosophila ananassae FBgn0097621 I 0.000
GG16442 Drosophila erecta FBgn0108673 I 0.000
GH24019 Drosophila grimshawi FBgn0131475 I 0.000
GI14052 Drosophila mojavensis FBgn0136806 I 0.000
GL18146 Drosophila persimilis FBgn0155749 I 0.000
GM26776 Drosophila sechellia FBgn0181629 I 0.000
GJ19930 Drosophila virilis FBgn0207072 I 0.000
GK13692 Drosophila willistoni FBgn0215700 I 0.000
GE14509 Drosophila yakuba FBgn0232113 I 0.000
GB44974 Apis mellifera GB44974 I 0.000
Gfo_R004293 Geospiza fortis Gfo_R004293 I 0.000
GPLIN_001402700 Globodera pallida GPLIN_001402700 I 0.000
HCOI00211900 Haemonchus contortus HCOI00211900 I 0.000
HCOI01108700 Haemonchus contortus HCOI01108700 I 0.000
HDID_0000079101 Hymenolepis diminuta HDID_0000079101 I 0.000
HelroG131179 Helobdella robusta HelroG131179 I 0.000
HelroG142791 Helobdella robusta HelroG142791 I 0.000
HelroG146354 Helobdella robusta HelroG146354 I 0.000
HMEL003746 Heliconius melpomene HMEL003746 I 0.000
HmN_000304300 Hymenolepis microstoma HmN_000304300 I 0.000
HmN_000916800 Hymenolepis microstoma HmN_000916800 I 0.000
HNAJ_0000311601 Hymenolepis nana HNAJ_0000311601 I 0.000
HNAJ_0001098701 Hymenolepis nana HNAJ_0001098701 I 0.000
Hsal_07483--XP_624996.2_APIME Harpegnathos saltator Hsal_07483--XP_624996.2_APIME I 0.000
KGM_19875 Danaus plexippus KGM_19875 I 0.000
L596_g14922 Steinernema carpocapsae L596_g14922 I 0.000
L889_g23716 Steinernema feltiae L889_g23716 I 0.000
L893_g27707 Steinernema glaseri L893_g27707 I 0.000
L898_g28854 Steinernema monticolum L898_g28854 I 0.000
LLOJ005577 Lutzomyia longipalpis LLOJ005577 I 0.000
LOAG_18692 Loa loa LOAG_18692 I 0.000
LotgiG199735 Lottia gigantea LotgiG199735 I 0.000
maker-nMf.1.1.scaf04609-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf04609-snap-gene-0.5 I 0.000
MCOS_0000716501 Mesocestoides corti MCOS_0000716501 I 0.000
MhA1_Contig20.frz3.gene53 Meloidogyne hapla MhA1_Contig20.frz3.gene53 I 0.000
Myotis_brandtii_ONECUT2_10017316 Myotis brandtii Myotis_brandtii_ONECUT2_10017316 I 0.000
NV10665 Nasonia vitripennis NV10665 I 0.000
Ogr13048 Ophisaurus gracilis Ogr13048 I 0.000
PHUM228480 Pediculus humanus PHUM228480 I 0.000
PHUM432770 Pediculus humanus PHUM432770 I 0.000
PPAI010631 Phlebotomus papatasi PPAI010631 I 0.000
Pvit_04983 Pogona vitticeps Pvit_04983 I 0.000
Pvit_09823 Pogona vitticeps Pvit_09823 I 0.000
RSKR_0000861100 Rhabditophanes kr3021 RSKR_0000861100 I 0.000
Sakowv30013296m.g Saccoglossus kowalevskii Sakowv30013296m.g I 0.000
SCUD_0001643701 Schistosoma curassoni SCUD_0001643701 I 0.000
Sjc_0006770 Schistosoma japonicum Sjc_0006770 I 0.000
SMAR002755 Strigamia maritima SMAR002755 I 0.000
Smp_013070 Schistosoma mansoni Smp_013070 I 0.000
Smp_196950 Schistosoma mansoni Smp_196950 I 0.000
SMRZ_0000163501 Schistosoma margrebowiei SMRZ_0000163501 I 0.000
SMTD_0000015201 Schistosoma mattheei SMTD_0000015201 I 0.000
SMU15004106 Schmidtea mediterranea SMU15004106 I 0.000
SMU15015821 Schmidtea mediterranea SMU15015821 I 0.000
SMU15026070 Schmidtea mediterranea SMU15026070 I 0.000
SMU15033099 Schmidtea mediterranea SMU15033099 I 0.000
SMU15040257 Schmidtea mediterranea SMU15040257 I 0.000
SMU15040258 Schmidtea mediterranea SMU15040258 I 0.000
SNAPOd2T00006698001 Oikopleura dioica SNAPOd2T00006698001 I 0.000
SPER_0000876901 Spirometra erinaceieuropaei SPER_0000876901 I 0.000
SPER_0000877001 Spirometra erinaceieuropaei SPER_0000877001 I 0.000
SPU_016449 Strongylocentrotus purpuratus SPU_016449 I 0.000
SROB_0000769301 Schistosoma rodhaini SROB_0000769301 I 0.000
T265_00751 Opisthorchis viverrini T265_00751 I 0.000
T265_01147 Opisthorchis viverrini T265_01147 I 0.000
TASK_0000698901 Taenia asiatica TASK_0000698901 I 0.000
TASK_0000912001 Taenia asiatica TASK_0000912001 I 0.000
TC004129 Tribolium castaneum TC004129 I 0.000
TCLT_0000532001 Thelazia callipaeda TCLT_0000532001 I 0.000
tetur31g00520 Tetranychus urticae tetur31g00520 I 0.000
TMUE_s0014009100 Trichuris muris TMUE_s0014009100 I 0.000
TsM_000579900 Taenia solium TsM_000579900 I 0.000
TsM_001008400 Taenia solium TsM_001008400 I 0.000
TTAC_0000985401 Hydatigera taeniaeformis TTAC_0000985401 I 0.000
TTRE_0000086601 Trichuris trichiura TTRE_0000086601 I 0.000
ceh-48 Caenorhabditis elegans WBGene00015934 D 0.000
onecut1.2 Xenopus tropicalis XB-GENE-1021674 I 0.000
onecut1 Xenopus tropicalis XB-GENE-480152 I 0.000
onecut3 Xenopus tropicalis XB-GENE-484505 I 0.000
YQE_09159 Dendroctonus ponderosae YQE_09159 I 0.000