CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU06503
(
Neurospora crassa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NCU06503
T144873_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06503
M01888_2.00
Neurospora crassa
NNCCCCDCNN
NNGHGGGGNN
PBM
Weirauch et al.(2014)
pTH8898
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01888_2.00
C2H2 ZF
40
62
YKCQFCARAFSRSEHRSRHERSH
M01888_2.00
C2H2 ZF
68
91
FKCLKCRSTFVRRDLLLRHDRTVH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU06503.1
C2H2 ZF
40
62
YKCQFCARAFSRSEHRSRHERSH
NCU06503.1
C2H2 ZF
68
91
FKCLKCRSTFVRRDLLLRHDRTVH
NCU06503.2
C2H2 ZF
40
62
YKCQFCARAFSRSEHRSRHERSH
NCU06503.2
C2H2 ZF
68
91
FKCLKCRSTFVRRDLLLRHDRTVH
Links
Other
C2H2 ZF
family TFs
Other
Neurospora crassa
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL002343
Aedes aegypti
AAEL002343
N
0.000
AAEL014740
Aedes aegypti
AAEL014740
N
0.000
AALB007750
Anopheles albimanus
AALB007750
N
0.000
Aan_R007988
Calypte anna
Aan_R007988
N
0.000
AARA001122
Anopheles arabiensis
AARA001122
N
0.000
ACEP14936
Atta cephalotes
ACEP14936
N
0.000
ACOM029080
Anopheles coluzzii
ACOM029080
N
0.000
ACUA021406
Anopheles culicifacies
ACUA021406
N
0.000
ACYPI001635
Acyrthosiphon pisum
ACYPI001635
N
0.000
ADAC003908
Anopheles darlingi
ADAC003908
N
0.000
ADIR001051
Anopheles dirus
ADIR001051
N
0.000
AEPI007278
Anopheles epiroticus
AEPI007278
N
0.000
AFAF017713
Anopheles farauti
AFAF017713
N
0.000
Afo_R000495
Aptenodytes forsteri
Afo_R000495
N
0.000
AFUN004699
Anopheles funestus
AFUN004699
N
0.000
AGAP000056
Anopheles gambiae
AGAP000056
N
0.000
AMAM000698
Anopheles maculatus
AMAM000698
N
0.000
AMEC022213
Anopheles melas
AMEC022213
N
0.000
AMEM001368
Anopheles merus
AMEM001368
N
0.000
AMIN002121
Anopheles minimus
AMIN002121
N
0.000
AQUA005712
Anopheles quadriannulatus
AQUA005712
N
0.000
ASIS013948
Anopheles sinensis
ASIS013948
N
0.000
ASTEI06194
Anopheles stephensi
ASTEI06194
N
0.000
BGLB001139
Biomphalaria glabrata
BGLB001139
N
0.000
Brh_R013374
Buceros rhinoceros
Brh_R013374
N
0.000
Cflo_02462--XP_391937.2_APIME
Camponotus floridanus
Cflo_02462--XP_391937.2_APIME
N
0.000
CGI_10014877
Crassostrea gigas
CGI_10014877
N
0.000
CLEC007310
Cimex lectularius
CLEC007310
N
0.000
CPIJ006378
Culex quinquefasciatus
CPIJ006378
N
0.000
CPIJ006379
Culex quinquefasciatus
CPIJ006379
N
0.000
CpipJ_CPIJ006378
Culex pipiens
CpipJ_CPIJ006378
N
0.000
CpipJ_CPIJ006379
Culex pipiens
CpipJ_CPIJ006379
N
0.000
DAPPUDRAFT_59022
Daphnia pulex
DAPPUDRAFT_59022
N
0.000
ENSAMEG00000018716
Ailuropoda melanoleuca
ENSAMEG00000018716
N
0.000
ENSAPLG00000000714
Anas platyrhynchos
ENSAPLG00000000714
N
0.000
NPAS3
Choloepus hoffmanni
ENSCHOG00000013756
N
0.000
NPAS3
Callithrix jacchus
ENSCJAG00000005437
N
0.000
NPAS3
Cavia porcellus
ENSCPOG00000006976
N
0.000
Npas3
Dipodomys ordii
ENSDORG00000000860
N
0.000
ENSECAG00000004630
Equus caballus
ENSECAG00000004630
N
0.000
NPAS3
Erinaceus europaeus
ENSEEUG00000006528
N
0.000
NPAS3
Echinops telfairi
ENSETEG00000016603
N
0.000
NPAS3
Homo sapiens
ENSG00000151322
N
0.000
NPAS3
Gallus gallus
ENSGALG00000029022
N
0.000
NPAS3
Gorilla gorilla
ENSGGOG00000022941
N
0.000
ENSLACG00000001145
Latimeria chalumnae
ENSLACG00000001145
N
0.000
NPAS3
Loxodonta africana
ENSLAFG00000007169
N
0.000
ENSMEUG00000012966
Macropus eugenii
ENSMEUG00000012966
N
0.000
ENSMGAG00000016559
Meleagris gallopavo
ENSMGAG00000016559
N
0.000
NPAS3
Macaca mulatta
ENSMMUG00000014839
N
0.000
ENSMODG00000024103
Monodelphis domestica
ENSMODG00000024103
N
0.000
ENSMPUG00000001046
Mustela putorius furo
ENSMPUG00000001046
N
0.000
Npas3
Mus musculus
ENSMUSG00000021010
N
0.000
ENSNLEG00000003239
Nomascus leucogenys
ENSNLEG00000003239
N
0.000
ENSOANG00000014043
Ornithorhynchus anatinus
ENSOANG00000014043
N
0.000
NPAS3
Otolemur garnettii
ENSOGAG00000014886
N
0.000
NPAS3
Ochotona princeps
ENSOPRG00000008184
N
0.000
ENSP00000348460
Macaca fascicularis
ENSP00000348460
N
0.000
ENSP00000348460-D1
Bos grunniens
ENSP00000348460-D1
N
0.000
NPAS3
Procavia capensis
ENSPCAG00000007391
N
0.000
ENSPSIG00000017052
Pelodiscus sinensis
ENSPSIG00000017052
N
0.000
NPAS3
Pan troglodytes
ENSPTRG00000006249
N
0.000
NPAS3
Sorex araneus
ENSSARG00000003164
N
0.000
ENSSHAG00000011475
Sarcophilus harrisii
ENSSHAG00000011475
N
0.000
ENSSSCG00000024473
Sus scrofa
ENSSSCG00000024473
N
0.000
ENSSTOG00000014736
Ictidomys tridecemlineatus
ENSSTOG00000014736
N
0.000
NPAS3
Tupaia belangeri
ENSTBEG00000016041
N
0.000
ENSTGUG00000011911
Taeniopygia guttata
ENSTGUG00000011911
N
0.000
NPAS3
Tursiops truncatus
ENSTTRG00000003266
N
0.000
NPAS3
Vicugna pacos
ENSVPAG00000001108
N
0.000
trh
Drosophila sechellia
FBgn0025046
N
0.000
GA19928
Drosophila pseudoobscura
FBgn0079924
N
0.000
GF24890
Drosophila ananassae
FBgn0101882
N
0.000
GG14662
Drosophila erecta
FBgn0106918
N
0.000
GH15456
Drosophila grimshawi
FBgn0122928
N
0.000
GH23748
Drosophila grimshawi
FBgn0131205
N
0.000
GI16736
Drosophila mojavensis
FBgn0139484
N
0.000
GD25707
Drosophila simulans
FBgn0196992
N
0.000
GJ12482
Drosophila virilis
FBgn0199724
N
0.000
GK20151
Drosophila willistoni
FBgn0222148
N
0.000
GE21022
Drosophila yakuba
FBgn0238304
N
0.000
trh
Drosophila melanogaster
FBgn0262139
N
0.000
GB52114
Apis mellifera
GB52114
N
0.000
Gfo_R012966
Geospiza fortis
Gfo_R012966
N
0.000
gw.84.113.1
Branchiostoma floridae
gw.84.113.1
N
0.000
HelroG63031
Helobdella robusta
HelroG63031
N
0.000
Hsal_10736--XP_391937.2_APIME
Harpegnathos saltator
Hsal_10736--XP_391937.2_APIME
N
0.000
ISCW018625
Ixodes scapularis
ISCW018625
N
0.000
L798_01241
Zootermopsis nevadensis
L798_01241
N
0.000
LCUP010821
Lucilia cuprina
LCUP010821
N
0.000
LDEC011477
Leptinotarsa decemlineata
LDEC011477
N
0.000
LotgiG127403
Lottia gigantea
LotgiG127403
N
0.000
MCINX015160
Melitaea cinxia
MCINX015160
N
0.000
MDOA009035
Musca domestica
MDOA009035
N
0.000
NEMVEDRAFT_v1g96877
Nematostella vectensis
NEMVEDRAFT_v1g96877
N
0.000
NV13641
Nasonia vitripennis
NV13641
N
0.000
Ocbimv22029779m.g
Octopus bimaculoides
Ocbimv22029779m.g
N
0.000
PHUM613040
Pediculus humanus
PHUM613040
N
0.000
Pvit_04747
Pogona vitticeps
Pvit_04747
N
0.000
Sakowv30006415m.g
Saccoglossus kowalevskii
Sakowv30006415m.g
N
0.000
SMAR015279
Strigamia maritima
SMAR015279
N
0.000
SPU_014249
Strongylocentrotus purpuratus
SPU_014249
N
0.000
Tal_R006980
Tyto alba
Tal_R006980
N
0.000
TC001448
Tribolium castaneum
TC001448
N
0.000
tetur01g16040
Tetranychus urticae
tetur01g16040
N
0.000
npas3
Xenopus tropicalis
XB-GENE-999791
N
0.000