PK27255.1 (Cannabis sativa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 PK27255.1 T144921_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.800 0.783
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.795 0.848
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.795 0.848
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.771 0.761
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.763 0.804
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.762 0.761
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.762 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK27255.1 C2H2 ZF 67 89
PK27255.1 C2H2 ZF 111 133

Links

Other C2H2 ZF family TFs
Other Cannabis sativa TFs

384 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006438 Ailuropoda melanoleuca ENSAMEG00000006438 N
ZXDC Bos taurus ENSBTAG00000009874 N
ZXDC Canis familiaris ENSCAFG00000003826 N
ENSCJAG00000003009 Callithrix jacchus ENSCJAG00000003009 N
ZXDC Cavia porcellus ENSCPOG00000002150 N
ENSCPOG00000005007 Cavia porcellus ENSCPOG00000005007 N
ENSCSAG00000008075 Chlorocebus sabaeus ENSCSAG00000008075 N
ZXDC Homo sapiens ENSG00000070476 N
ZXDC Gorilla gorilla ENSGGOG00000009938 N
ENSLAFG00000017963 Loxodonta africana ENSLAFG00000017963 N
ENSMICG00000009255 Microcebus murinus ENSMICG00000009255 N
ENSMODG00000007443 Monodelphis domestica ENSMODG00000007443 N
ENSMPUG00000017379 Mustela putorius furo ENSMPUG00000017379 N
Zxdc Mus musculus ENSMUSG00000034430 N
ENSNLEG00000001066 Nomascus leucogenys ENSNLEG00000001066 N
ENSOARG00000004624 Ovis aries ENSOARG00000004624 N
ENSOARG00000005360 Ovis aries ENSOARG00000005360 N
ENSOCUG00000003505 Oryctolagus cuniculus ENSOCUG00000003505 N
ZXDC Oryctolagus cuniculus ENSOCUG00000022942 N
ZXDC Otolemur garnettii ENSOGAG00000028511 N
ZXDC Ochotona princeps ENSOPRG00000005300 N
ENSPANG00000000433 Papio anubis ENSPANG00000000433 N
ENSPCAG00000012425 Procavia capensis ENSPCAG00000012425 N
ENSPPYG00000013453 Pongo abelii ENSPPYG00000013453 N
ZXDC Pan troglodytes ENSPTRG00000015332 N
ENSSTOG00000007207 Ictidomys tridecemlineatus ENSSTOG00000007207 N
ENSTSYG00000007412 Tarsius syrichta ENSTSYG00000007412 N