CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15013237
(
Schmidtea mediterranea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMU15013237
T145114_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15013237
C2H2 ZF
466
488
DTCEYCGKIFKNCSNLTVHRRSH
SMU15013237
C2H2 ZF
494
516
YKCKLCNYACAQSSKLTRHMKTH
SMU15013237
C2H2 ZF
524
545
HFCKYCNTPFIVPSTLEKHMRK
Links
Other
C2H2 ZF
family TFs
Other
Schmidtea mediterranea
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_08193
Schistosoma haematobium
A_08193
N
0.795
BGIBMGA008374
Bombyx mori
BGIBMGA008374
N
0.796
CGI_10011779
Crassostrea gigas
CGI_10011779
N
0.779
D915_04219
Fasciola hepatica
D915_04219
N
0.791
DAPPUDRAFT_323911
Daphnia pulex
DAPPUDRAFT_323911
N
0.800
ECANG7_02157
Echinococcus canadensis
ECANG7_02157
N
0.794
ECPE_0000996601
Echinostoma caproni
ECPE_0000996601
N
0.787
EmuJ_000533400
Echinococcus multilocularis
EmuJ_000533400
N
0.794
BCL11A
Choloepus hoffmanni
ENSCHOG00000001307
N
0.773
Bcl11b
Dipodomys ordii
ENSDORG00000008688
N
0.773
BCL11A
Echinops telfairi
ENSETEG00000013765
N
0.773
ENSLACG00000014710
Latimeria chalumnae
ENSLACG00000014710
N
0.773
BCL11B
Myotis lucifugus
ENSMLUG00000012475
N
0.773
BCL11A
Ochotona princeps
ENSOPRG00000013110
N
0.773
BCL11A
Sorex araneus
ENSSARG00000014228
N
0.773
HDID_0000528601
Hymenolepis diminuta
HDID_0000528601
N
0.794
HmN_000666900
Hymenolepis microstoma
HmN_000666900
N
0.794
HNAJ_0001153001
Hymenolepis nana
HNAJ_0001153001
N
0.794
LLOJ007213
Lutzomyia longipalpis
LLOJ007213
N
0.800
MCOS_0000058201
Mesocestoides corti
MCOS_0000058201
N
0.768
MESCA009586
Megaselia scalaris
MESCA009586
N
0.800
NV21669
Nasonia vitripennis
NV21669
N
0.800
Ogr07179
Ophisaurus gracilis
Ogr07179
N
0.773
PXEA_0003276301
Protopolystoma xenopodis
PXEA_0003276301
N
0.776
SCUD_0001652401
Schistosoma curassoni
SCUD_0001652401
N
0.795
Sjc_0000360
Schistosoma japonicum
Sjc_0000360
N
0.795
Smp_124090
Schistosoma mansoni
Smp_124090
N
0.795
SMRZ_0000432901
Schistosoma margrebowiei
SMRZ_0000432901
N
0.795
SMTD_0002224301
Schistosoma mattheei
SMTD_0002224301
N
0.795
SROB_0000141701
Schistosoma rodhaini
SROB_0000141701
N
0.795
SSLN_0000393701
Schistocephalus solidus
SSLN_0000393701
N
0.808
TASK_0000715001
Taenia asiatica
TASK_0000715001
N
0.794
tetur13g02970
Tetranychus urticae
tetur13g02970
N
0.789
TRE_0001350701
Trichobilharzia regenti
TRE_0001350701
N
0.795
TsM_000205200
Taenia solium
TsM_000205200
N
0.794
TTAC_0000333401
Hydatigera taeniaeformis
TTAC_0000333401
N
0.794
YQE_00360
Dendroctonus ponderosae
YQE_00360
N
0.796
YQE_00727
Dendroctonus ponderosae
YQE_00727
N
0.796
YQE_02914
Dendroctonus ponderosae
YQE_02914
N
0.796