bcl6.L (Xenopus laevis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-984483 T145709_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL6
M00228_2.00 		Homo sapiens
NNVNDVRANN
NNTYBHNBNN		 PBM
Barrera et al.(2016)
BCL6_REF 		0.787 0.971
BCL6
M04424_2.00 		Homo sapiens
NYGCTTTCKAGGAAHN
NDTTCCTMGAAAGCRN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_1 		0.787 0.971
BCL6
M04425_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_2 		0.787 0.971
Bcl6
M08097_2.00 		Mus musculus
NDCYYTCYAGGAAN
NTTCCTRGARRGHN		 ChIP-seq
Mathelier et al.(2014)
MA0463.1 		0.787 0.971
Bcl6
M08024_2.00 		Mus musculus
HYNBHHWBWSHTCHYNYYYYYYNBYYHYYH
DRRDRRVNRRRRRRNRDGADSWVWDDVNRD		 ChIP-seq
Chen et al.(2011)
SRP001843_Bcl6_IgG_LPSstim 		0.787 0.971
BCL6
M08877_2.00 		Homo sapiens
NNMYYTCYAGGAA
TTCCTRGARRKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_HUMAN.H11MO.0.A 		0.787 0.971
Bcl6
M08972_2.00 		Mus musculus
NNMTYTCYAGGAA
TTCCTRGARAKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_MOUSE.H11MO.0.A 		0.787 0.971
Bcl6
M09513_2.00 		Mus musculus
NNNNYTTCYWGGAAN
NTTCCWRGAARNNNN		 Misc
Heinz et al.(2010)
Liver-Bcl6_GSE31578 		0.787 0.971
BCL6
M10180_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_01 		0.787 0.971
BCL6
M10181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_02 		0.787 0.971
BCL6
M10182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3_01 		0.787 0.971
BCL6
M10183_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3 		0.787 0.971
BCL6
M10184_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q6 		0.787 0.971
BCL6
M04426_2.00 		Homo sapiens
NTGCTTTCTAGGAAHN
NDTTCCTAGAAAGCAN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_1 		0.787 0.971
BCL6
M04427_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_2 		0.787 0.971
BCL6
M00227_2.00 		Homo sapiens
NTAATTRWNN
NNWYAATTAN		 PBM
Barrera et al.(2016)
BCL6_H676Y 		0.780 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH84912 C2H2 ZF 513 536
AAH84912 C2H2 ZF 541 563
AAH84912 C2H2 ZF 569 591
AAH84912 C2H2 ZF 597 619
AAH84912 C2H2 ZF 625 647
AAH84912 C2H2 ZF 653 676
AAI10966 C2H2 ZF 513 536
AAI10966 C2H2 ZF 541 563
AAI10966 C2H2 ZF 569 591
AAI10966 C2H2 ZF 597 619
AAI10966 C2H2 ZF 625 647
AAI10966 C2H2 ZF 653 676

Links

Other C2H2 ZF family TFs
Other Xenopus laevis TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL013408 Aedes aegypti AAEL013408 I 0.000
AALB004583 Anopheles albimanus AALB004583 I 0.000
Aan_R010721 Calypte anna Aan_R010721 I 0.000
AARA003510 Anopheles arabiensis AARA003510 I 0.000
AATE015987 Anopheles atroparvus AATE015987 I 0.000
ACEP13992 Atta cephalotes ACEP13992 I 0.000
ACHR007416 Anopheles christyi ACHR007416 I 0.000
ACOM036369 Anopheles coluzzii ACOM036369 I 0.000
ACUA011008 Anopheles culicifacies ACUA011008 I 0.000
ACYPI005878 Acyrthosiphon pisum ACYPI005878 N 0.000
ACYPI29974 Acyrthosiphon pisum ACYPI29974 N 0.000
ACYPI34776 Acyrthosiphon pisum ACYPI34776 N 0.000
ADAC006957 Anopheles darlingi ADAC006957 I 0.000
AEPI005273 Anopheles epiroticus AEPI005273 I 0.000
AFAF013455 Anopheles farauti AFAF013455 I 0.000
Afo_R011879 Aptenodytes forsteri Afo_R011879 I 0.000
AFUN005053 Anopheles funestus AFUN005053 I 0.000
AGAP004905 Anopheles gambiae AGAP004905 I 0.000
AMAM018568 Anopheles maculatus AMAM018568 I 0.000
AMEC000569 Anopheles melas AMEC000569 I 0.000
AMEM010249 Anopheles merus AMEM010249 I 0.000
AMIN011402 Anopheles minimus AMIN011402 I 0.000
AQUA000322 Anopheles quadriannulatus AQUA000322 I 0.000
ASIS014192 Anopheles sinensis ASIS014192 I 0.000
ASTEI10643 Anopheles stephensi ASTEI10643 I 0.000
BGIBMGA002019 Bombyx mori BGIBMGA002019 I 0.000
BGLB009094 Biomphalaria glabrata BGLB009094 I 0.000
CapteG228571 Capitella teleta CapteG228571 I 0.000
Cflo_07037--XP_395757.2_APIME Camponotus floridanus Cflo_07037--XP_395757.2_APIME I 0.000
CLEC001236 Cimex lectularius CLEC001236 I 0.000
CPIJ007045 Culex quinquefasciatus CPIJ007045 I 0.000
CpipJ_CPIJ007045 Culex pipiens CpipJ_CPIJ007045 I 0.000
DEAF1 Anolis carolinensis ENSACAG00000015102 I 0.000
ENSAMEG00000010672 Ailuropoda melanoleuca ENSAMEG00000010672 I 0.000
ENSAPLG00000011215 Anas platyrhynchos ENSAPLG00000011215 I 0.000
DEAF1 Canis familiaris ENSCAFG00000006569 I 0.000
DEAF1 Callithrix jacchus ENSCJAG00000011996 I 0.000
DEAF1 Cavia porcellus ENSCPOG00000006073 I 0.000
DEAF1 Dasypus novemcinctus ENSDNOG00000000274 I 0.000
Deaf1 Dipodomys ordii ENSDORG00000015737 I 0.000
ENSFALG00000010923 Ficedula albicollis ENSFALG00000010923 I 0.000
DEAF1 Felis catus ENSFCAG00000007591 I 0.000
ENSGALG00000005089 Gallus gallus ENSGALG00000005089 I 0.000
DEAF1 Loxodonta africana ENSLAFG00000023242 I 0.000
DEAF1 Meleagris gallopavo ENSMGAG00000003765 I 0.000
ENSMPUG00000008992 Mustela putorius furo ENSMPUG00000008992 I 0.000
Deaf1 Mus musculus ENSMUSG00000058886 I 0.000
ENSOARG00000006285 Ovis aries ENSOARG00000006285 I 0.000
DEAF1 Otolemur garnettii ENSOGAG00000006434 I 0.000
ENSOPRG00000002240 Ochotona princeps ENSOPRG00000002240 I 0.000
ENSP00000371846-D1 Bos grunniens ENSP00000371846-D1 I 0.000
ENSPMAG00000004264 Petromyzon marinus ENSPMAG00000004264 I 0.000
DEAF1 Pteropus vampyrus ENSPVAG00000006883 I 0.000
Deaf1 Rattus norvegicus ENSRNOG00000017960 I 0.000
DEAF1 Sus scrofa ENSSSCG00000012850 I 0.000
ENSSTOG00000004165 Ictidomys tridecemlineatus ENSSTOG00000004165 I 0.000
DEAF1 Taeniopygia guttata ENSTGUG00000007185 I 0.000
DEAF1 Tursiops truncatus ENSTTRG00000015418 I 0.000
Deaf1 Drosophila melanogaster FBgn0013799 D 0.000
GA21169 Drosophila pseudoobscura FBgn0081157 I 0.000
GF23595 Drosophila ananassae FBgn0100589 I 0.000
GG16060 Drosophila erecta FBgn0108295 I 0.000
GH14660 Drosophila grimshawi FBgn0122136 I 0.000
GI11644 Drosophila mojavensis FBgn0134404 I 0.000
GM19656 Drosophila sechellia FBgn0174556 I 0.000
GD14830 Drosophila simulans FBgn0186503 I 0.000
GJ11325 Drosophila virilis FBgn0198585 I 0.000
GK16969 Drosophila willistoni FBgn0218968 I 0.000
GE19626 Drosophila yakuba FBgn0236964 I 0.000
GE23216 Drosophila yakuba FBgn0240415 I 0.000
fgenesh2_pg.scaffold_59000067 Branchiostoma floridae fgenesh2_pg.scaffold_59000067 I 0.000
fgenesh2_pg.scaffold_59000072 Branchiostoma floridae fgenesh2_pg.scaffold_59000072 I 0.000
GB41654 Apis mellifera GB41654 I 0.000
Gfo_R011899 Geospiza fortis Gfo_R011899 I 0.000
HHAL006904-PA Halyomorpha halys HHAL006904-PA I 0.000
HMEL013517 Heliconius melpomene HMEL013517 I 0.000
Hsal_03559--XP_395757.2_APIME Harpegnathos saltator Hsal_03559--XP_395757.2_APIME I 0.000
ISCW003915 Ixodes scapularis ISCW003915 I 0.000
KGM_18605 Danaus plexippus KGM_18605 I 0.000
L798_01684 Zootermopsis nevadensis L798_01684 I 0.000
LCUP007674 Lucilia cuprina LCUP007674 I 0.000
LDEC013410 Leptinotarsa decemlineata LDEC013410 I 0.000
LLOJ006782 Lutzomyia longipalpis LLOJ006782 I 0.000
MCINX013640 Melitaea cinxia MCINX013640 I 0.000
MDOA003373 Musca domestica MDOA003373 I 0.000
NV18168 Nasonia vitripennis NV18168 I 0.000
Ocbimv22013386m.g Octopus bimaculoides Ocbimv22013386m.g I 0.000
Ogr05554 Ophisaurus gracilis Ogr05554 I 0.000
PHUM581340 Pediculus humanus PHUM581340 I 0.000
PPAI007052 Phlebotomus papatasi PPAI007052 I 0.000
Pvit_08245 Pogona vitticeps Pvit_08245 I 0.000
RPRC001228 Rhodnius prolixus RPRC001228 I 0.000
Sakowv30032927m.g Saccoglossus kowalevskii Sakowv30032927m.g I 0.000
SINV20880 Solenopsis invicta SINV20880 I 0.000
SMAR003119 Strigamia maritima SMAR003119 I 0.000
SPU_014381 Strongylocentrotus purpuratus SPU_014381 N 0.000
TC000085 Tribolium castaneum TC000085 I 0.000
YQE_06816 Dendroctonus ponderosae YQE_06816 I 0.000