18885_YNL027W (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 18885_YNL027W T145941_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRZ1
M00038_2.00 		Saccharomyces cerevisiae
NNDCTRHGCCNN
NNGGCDYAGHNN		 PBM
Badis et al.(2008)
CRZ1_4531 		0.827 1.000
CRZ1
M07468_2.00 		Saccharomyces cerevisiae
NNVMGCCHC
GDGGCKBNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0285.1 		0.827 1.000
CRZ1
M08541_2.00 		Saccharomyces cerevisiae
NNVMGCCHC
GDGGCKBNN		 Misc
DeBoer et al.(2011)
YNL027W_516 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
18885_YNL027W C2H2 ZF 562 584
18885_YNL027W C2H2 ZF 590 612
18885_YNL027W C2H2 ZF 618 648

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
19232_YNL027W Saccharomyces paradoxus 19232_YNL027W I 0.827
21534_YNL027W Saccharomyces bayanus 21534_YNL027W I 0.827
AACERI_AaceriADL198W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL198W I 0.784
AGOS_ADL198W Ashbya gossypii AGOS_ADL198W I 0.784
BN7_1577 Wickerhamomyces ciferrii BN7_1577 I 0.757
CAGL0M06831g Candida glabrata CAGL0M06831g I 0.792
CORT_0C02060 Candida orthopsilosis CORT_0C02060 I 0.756
CPAG_02889 Candida parapsilosis CPAG_02889 I 0.756
Ecym_3341 Eremothecium cymbalariae Ecym_3341 I 0.784
GNLVRS01_PISO0E04118g Millerozyma farinosa GNLVRS01_PISO0E04118g I 0.756
GNLVRS01_PISO0F05527g Millerozyma farinosa GNLVRS01_PISO0F05527g I 0.756
KAFR_0H03240 Kazachstania africana KAFR_0H03240 I 0.772
KLLA0_E08713g Kluyveromyces lactis KLLA0_E08713g I 0.764
KLTH0G10802g Lachancea thermotolerans KLTH0G10802g I 0.781
KLTH0G10802g Kluyveromyces thermotolerans KLTH0G10802g I 0.781
KNAG_0H01930 Kazachstania naganishii KNAG_0H01930 I 0.791
Kpol_1003p50 Vanderwaltozyma polyspora Kpol_1003p50 I 0.784
Kwal_11460 Kluyveromyces waltii Kwal_11460 I 0.781
LALA0_S03e01288g Lachancea lanzarotensis LALA0_S03e01288g I 0.804
LELG_02783 Lodderomyces elongisporus LELG_02783 I 0.756
NCAS_0G03730 Naumovozyma castellii NCAS_0G03730 I 0.800
NDAI_0G00720 Naumovozyma dairenensis NDAI_0G00720 I 0.784
SAKL0E07216g Lachancea kluyveri SAKL0E07216g I 0.780
Scas_Contig695.2 Saccharomyces castellii Scas_Contig695.2 I 0.800
TBLA_0B06050 Tetrapisispora blattae TBLA_0B06050 I 0.804
TDEL_0G02330 Torulaspora delbrueckii TDEL_0G02330 I 0.816
CRZ1 Saccharomyces cerevisiae YNL027W D 0.827
ZBAI_00257 Zygosaccharomyces bailii ZBAI_00257 I 0.804
ZBAI_05417 Zygosaccharomyces bailii ZBAI_05417 I 0.804
ZYRO0A02288g Zygosaccharomyces rouxii ZYRO0A02288g I 0.804