AATE001257 (Anopheles atroparvus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 AATE001257 T147167_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bowl
M03676_2.00
Drosophila melanogaster
GCGTAABACNRGKAGYN

NRCTMCYNGTVTTACGC
SELEX
Nitta et al.(2015)
bowl_1
0.811 0.957
bowl
M03677_2.00
Drosophila melanogaster
NGCTACYGTRTTACGCN

NGCGTAAYACRGTAGCN
SELEX
Nitta et al.(2015)
bowl_2
0.811 0.957
sob
M03674_2.00
Drosophila melanogaster
RCTACYGNRTTACGCV

BGCGTAAYNCRGTAGY
SELEX
Nitta et al.(2015)
sob_1
0.811 0.957
sob
M03675_2.00
Drosophila melanogaster
NGCGTAABNSNRGTAGY

RCTACYNSNVTTACGCN
SELEX
Nitta et al.(2015)
sob_2
0.811 0.957
bowl
M06090_2.00
Drosophila melanogaster
RCTWCYGK

MCRGWAGY
B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893
0.811 0.957
sob
M06088_2.00
Drosophila melanogaster
GCTWCTGBDNBDV

BHVNHVCAGWAGC
B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892
0.811 0.957
sob
M06089_2.00
Drosophila melanogaster
BDGCTACYGKDBNN

NNVHMCRGTAGCHV
B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892
0.811 0.957
OSR2
M04521_2.00
Homo sapiens
NGCTACYGBD

HVCRGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX
0.795 0.896
OSR2
M08324_2.00
Homo sapiens
NBDGCTNCTGN

NCAGNAGCHVN
ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME
0.795 0.896
OSR2
M08908_2.00
Homo sapiens
NBHNYWGCTNCTSHDB

VHDSAGNAGCWRNDVN
Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C
0.795 0.896
OSR2
M04522_2.00
Homo sapiens
NGCTACTGND

HNCAGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX
0.795 0.896
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AATE001257-PA C2H2 ZF 335 357
AATE001257-PA C2H2 ZF 363 385
AATE001257-PA C2H2 ZF 391 413
AATE001257-PA C2H2 ZF 419 441
AATE001257-PA C2H2 ZF 447 469

Links

Other C2H2 ZF family TFs
Other Anopheles atroparvus TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
EuGene15000120 Heterobasidion annosum EuGene15000120 N 0.000
EuGene3001157 Heterobasidion annosum EuGene3001157 N 0.000
fgenesh3_kg.15__10__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.15__10__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
fgenesh3_kg.15__30__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.15__30__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
fgenesh3_kg.27__1__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.27__1__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
fgenesh3_kg.3__397__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.3__397__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
HETIRDRAFT_144838 Heterobasidion irregulare HETIRDRAFT_144838 N 0.000
HETIRDRAFT_165304 Heterobasidion irregulare HETIRDRAFT_165304 N 0.000
HETIRDRAFT_316533 Heterobasidion irregulare HETIRDRAFT_316533 N 0.000
HETIRDRAFT_316690 Heterobasidion irregulare HETIRDRAFT_316690 N 0.000
HETIRDRAFT_412619 Heterobasidion irregulare HETIRDRAFT_412619 N 0.000
HETIRDRAFT_419047 Heterobasidion irregulare HETIRDRAFT_419047 N 0.000
HETIRDRAFT_440636 Heterobasidion irregulare HETIRDRAFT_440636 N 0.000
Moror_495 Moniliophthora roreri Moror_495 N 0.000