LLOJ001734 (Lutzomyia longipalpis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LLOJ001734 T150922_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
odd
M03667_2.00
Drosophila melanogaster
WGCTACCGGTAGCH

DGCTACCGGTAGCW
SELEX
Nitta et al.(2015)
odd_1
0.788 0.946
odd
M06467_2.00
Drosophila melanogaster
BTGCTACTGKD

HMCAGTAGCAV
B1H
Mathelier et al.(2014)
MA0454.1
0.788 0.946
odd
M06058_2.00
Drosophila melanogaster
BTGCTACTGKD

HMCAGTAGCAV
B1H
Zhu et al.(2011)
odd_NAR_FBgn0002985
0.788 0.946
odd
M06059_2.00
Drosophila melanogaster
GCTWCYGDW

WHCRGWAGC
B1H
Zhu et al.(2011)
odd_NBT_1.5_FBgn0002985
0.788 0.946
odd
M06060_2.00
Drosophila melanogaster
GCTACYGKD

HMCRGTAGC
B1H
Zhu et al.(2011)
odd_NBT_2.5_FBgn0002985
0.788 0.946
odd
M06061_2.00
Drosophila melanogaster
GCTACTGKD

HMCAGTAGC
B1H
Zhu et al.(2011)
odd_NBT_5_FBgn0002985
0.788 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LLOJ001734-PA C2H2 ZF 226 248
LLOJ001734-PA C2H2 ZF 254 276
LLOJ001734-PA C2H2 ZF 282 304
LLOJ001734-PA C2H2 ZF 310 332

Links

Other C2H2 ZF family TFs
Other Lutzomyia longipalpis TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_19498 Ancylostoma caninum ANCCAN_19498 N
EVEC_0001275201 Enterobius vermicularis EVEC_0001275201 N
L893_g11083 Steinernema glaseri L893_g11083 N
Ocbimv22030938m.g Octopus bimaculoides Ocbimv22030938m.g N
Ppa-lin-48 Pristionchus pacificus PPA24660 N
PXEA_0002741601 Protopolystoma xenopodis PXEA_0002741601 N
scaffold1374-EXSNAP2012.3 Pristionchus exspectatus scaffold1374-EXSNAP2012.3 N
SVUK_0000264301 Strongylus vulgaris SVUK_0000264301 N
TELCIR_07126 Teladorsagia circumcincta TELCIR_07126 N
WUBG_18045 Wuchereria bancrofti WUBG_18045 N
YQE_01103 Dendroctonus ponderosae YQE_01103 N
YQE_01104 Dendroctonus ponderosae YQE_01104 N