CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LLOJ001734
(
Lutzomyia longipalpis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LLOJ001734
T150922_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odd
M03667_2.00
Drosophila melanogaster
WGCTACCGGTAGCH
DGCTACCGGTAGCW
SELEX
Nitta et al.(2015)
odd_1
0.788
0.946
odd
M06467_2.00
Drosophila melanogaster
BTGCTACTGKD
HMCAGTAGCAV
B1H
Mathelier et al.(2014)
MA0454.1
0.788
0.946
odd
M06058_2.00
Drosophila melanogaster
BTGCTACTGKD
HMCAGTAGCAV
B1H
Zhu et al.(2011)
odd_NAR_FBgn0002985
0.788
0.946
odd
M06059_2.00
Drosophila melanogaster
GCTWCYGDW
WHCRGWAGC
B1H
Zhu et al.(2011)
odd_NBT_1.5_FBgn0002985
0.788
0.946
odd
M06060_2.00
Drosophila melanogaster
GCTACYGKD
HMCRGTAGC
B1H
Zhu et al.(2011)
odd_NBT_2.5_FBgn0002985
0.788
0.946
odd
M06061_2.00
Drosophila melanogaster
GCTACTGKD
HMCAGTAGC
B1H
Zhu et al.(2011)
odd_NBT_5_FBgn0002985
0.788
0.946
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LLOJ001734-PA
C2H2 ZF
226
248
FICKYCNRHFTKSYNLLIHERTH
LLOJ001734-PA
C2H2 ZF
254
276
YSCDICGKAFRRQDHLRDHRYIH
LLOJ001734-PA
C2H2 ZF
282
304
FKCSDCGKGFCQSRTLAVHKITH
LLOJ001734-PA
C2H2 ZF
310
332
HKCPICSRSFNQRANLKTHMQSH
Links
Other
C2H2 ZF
family TFs
Other
Lutzomyia longipalpis
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_19498
Ancylostoma caninum
ANCCAN_19498
N
EVEC_0001275201
Enterobius vermicularis
EVEC_0001275201
N
L893_g11083
Steinernema glaseri
L893_g11083
N
Ocbimv22030938m.g
Octopus bimaculoides
Ocbimv22030938m.g
N
Ppa-lin-48
Pristionchus pacificus
PPA24660
N
PXEA_0002741601
Protopolystoma xenopodis
PXEA_0002741601
N
scaffold1374-EXSNAP2012.3
Pristionchus exspectatus
scaffold1374-EXSNAP2012.3
N
SVUK_0000264301
Strongylus vulgaris
SVUK_0000264301
N
TELCIR_07126
Teladorsagia circumcincta
TELCIR_07126
N
WUBG_18045
Wuchereria bancrofti
WUBG_18045
N
YQE_01103
Dendroctonus ponderosae
YQE_01103
N
YQE_01104
Dendroctonus ponderosae
YQE_01104
N