ECANG7_05597 (Echinococcus canadensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ECANG7_05597 T153221_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.787 0.884
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.787 0.884
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.787 0.884
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.787 0.870
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.787 0.870
Sp1
M03682_2.00 		Drosophila melanogaster
HNGCCACGCCCARK
MYTGGGCGTGGCND		 SELEX
Nitta et al.(2015)
Sp1_1 		0.774 0.870
Sp1
M06117_2.00 		Drosophila melanogaster
DHYMCGCCCMY
RKGGGCGKRDH		 B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378 		0.774 0.870
Sp1
M06118_2.00 		Drosophila melanogaster
NKHHMCGCCCMYNN
NNRKGGGCGKDDMN		 B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378 		0.774 0.870
SP3
M02910_2.00 		Homo sapiens
VCCMCRCCCMY
RKGGGYGKGGB		 SELEX
Jolma et al.(2013)
SP3_1 		0.757 0.812
SP3
M04558_2.00 		Homo sapiens
NRCCACGCCCMYH
DRKGGGCGTGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_HT-SELEX 		0.757 0.812
SP3
M08920_2.00 		Homo sapiens
NBBNVSCCCCKCCCMBBBNN
NNVVVKGGGMGGGGSBNVVN		 Misc
Kulakovskiy et al.(2013)
SP3_HUMAN.H11MO.0.B 		0.757 0.812
SP3
M10263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3_01 		0.757 0.812
SP3
M10264_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3 		0.757 0.812
SP3
M04559_2.00 		Homo sapiens
NRCCMCGCCCMCH
DGKGGGCGKGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_Methyl-HT-SELEX 		0.757 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ECANG7_05597 C2H2 ZF 231 255
ECANG7_05597 C2H2 ZF 261 285
ECANG7_05597 C2H2 ZF 291 313

Links

Other C2H2 ZF family TFs
Other Echinococcus canadensis TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA002940 Oryza indica BGIOSGA002940 N
BGIOSGA002943 Oryza indica BGIOSGA002943 N
BGIOSGA003814 Oryza indica BGIOSGA003814 N
BRADI2G41670 Brachypodium distachyon BRADI2G41670 N
GRMZM2G333582 Zea mays GRMZM2G333582 N
GRMZM2G397755 Zea mays GRMZM2G397755 N
GRMZM2G463133 Zea mays GRMZM2G463133 N
GRMZM5G849600 Zea mays GRMZM5G849600 N
LPERR01G05820 Leersia perrieri LPERR01G05820 N
LPERR01G17450 Leersia perrieri LPERR01G17450 N
MLOC_70258 Hordeum vulgare MLOC_70258 N
OB01G16120 Oryza brachyantha OB01G16120 N
OB01G30040 Oryza brachyantha OB01G30040 N
OBART01G06120 Oryza barthii OBART01G06120 N
OBART01G06170 Oryza barthii OBART01G06170 N
OBART01G20310 Oryza barthii OBART01G20310 N
OGLUM01G06690 Oryza glumaepatula OGLUM01G06690 N
OGLUM01G06730 Oryza glumaepatula OGLUM01G06730 N
OGLUM01G23890 Oryza glumaepatula OGLUM01G23890 N
OLONG_006433 Oryza longistaminata OLONG_006433 N
OMERI01G06310 Oryza meridionalis OMERI01G06310 N
OMERI01G18730 Oryza meridionalis OMERI01G18730 N
ONIVA01G07080 Oryza nivara ONIVA01G07080 N
ONIVA01G07190 Oryza nivara ONIVA01G07190 N
ONIVA01G22870 Oryza nivara ONIVA01G22870 N
OPUNC01G20610 Oryza punctata OPUNC01G20610 N
ORGLA01G0058200 Oryza glaberrima ORGLA01G0058200 N
ORGLA01G0397100 Oryza glaberrima ORGLA01G0397100 N
ORGLA08G0199700 Oryza glaberrima ORGLA08G0199700 N
ORUFI01G06710 Oryza rufipogon ORUFI01G06710 N
ORUFI01G22920 Oryza rufipogon ORUFI01G22920 N
OS01G0195801 Oryza sativa OS01G0195801 N
OS01G0196300 Oryza sativa OS01G0196300 N
OS01G0575200 Oryza sativa OS01G0575200 N
Pavir.Ea00369 Panicum virgatum Pavir.Ea00369 N
Pavir.Ea01566 Panicum virgatum Pavir.Ea01566 N
Sb03g002910 Sorghum bicolor Sb03g002910 N
Sb03g025860 Sorghum bicolor Sb03g025860 N
Si001328m.g Setaria italica Si001328m.g N
Si001494m.g Setaria italica Si001494m.g N
TRAES3BF047700010CFD_g Triticum aestivum TRAES3BF047700010CFD_g N