CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ECPE_0000283101
(
Echinostoma caproni
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ECPE_0000283101
T153260_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ECPE_0000283101-mRNA-1
C2H2 ZF
248
272
FACTMFDCTKRFARIDELKRHQRIH
ECPE_0000283101-mRNA-1
C2H2 ZF
278
300
FVCESCNKGFTRSDHLMTHRRTH
ECPE_0000283101-mRNA-1
C2H2 ZF
306
328
YPCFHCERRFARSDERNRHSKVH
Links
Other
C2H2 ZF
family TFs
Other
Echinostoma caproni
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB09G20240
Oryza brachyantha
OB09G20240
N
OBART09G13690
Oryza barthii
OBART09G13690
N
OGLUM09G14270
Oryza glumaepatula
OGLUM09G14270
N
OLONG_013598
Oryza longistaminata
OLONG_013598
N
ONIVA09G14210
Oryza nivara
ONIVA09G14210
N
OPUNC09G12080
Oryza punctata
OPUNC09G12080
N
ORGLA09G0104400
Oryza glaberrima
ORGLA09G0104400
N
ORUFI09G14680
Oryza rufipogon
ORUFI09G14680
N
Pavir.Fb01815
Panicum virgatum
Pavir.Fb01815
N
Sb02g027370
Sorghum bicolor
Sb02g027370
N