MhA1_Contig1061.frz3.gene12 (Meloidogyne hapla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 MhA1_Contig1061.frz3.gene12 T154950_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.785 0.837
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.785 0.837
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.785 0.837
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig1061.frz3.gene12 C2H2 ZF 313 335
MhA1_Contig1061.frz3.gene12 C2H2 ZF 341 363
MhA1_Contig1061.frz3.gene12 C2H2 ZF 369 391
MhA1_Contig1061.frz3.gene12 C2H2 ZF 397 420

Links

Other C2H2 ZF family TFs
Other Meloidogyne hapla TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSGGOG00000009307 Gorilla gorilla ENSGGOG00000009307 N
ENSMMUP00000024341 Macaca fascicularis ENSMMUP00000024341 N
ENSOGAG00000026765 Otolemur garnettii ENSOGAG00000026765 N