CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g07581
(
Acanthocheilonema viteae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nAv.1.0.1.g07581
T155040_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t07581-RA
C2H2 ZF
51
73
LICNQCGKSYATTSNLSRHKQTH
nAv.1.0.1.t07581-RA
C2H2 ZF
82
104
KQCPNCDRVYVSMPALSMHMLTH
nAv.1.0.1.t07581-RA
C2H2 ZF
108
130
HKCTQCDKTFSRPWLLQGHMRAH
nAv.1.0.1.t07581-RA
C2H2 ZF
136
158
YGCAHCGKAFADRSNLRAHMHTH
nAv.1.0.1.t07581-RA
C2H2 ZF
164
185
YECSGCGKLFALKSYLNKHIEL
Links
Other
C2H2 ZF
family TFs
Other
Acanthocheilonema viteae
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CH063_11891
Colletotrichum higginsianum
CH063_11891
N
GLRG_03455
Colletotrichum graminicola
GLRG_03455
N