CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0000204501
(
Nippostrongylus brasiliensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NBR_0000204501
T155067_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0000204501-mRNA-1
C2H2 ZF
317
338
YACEYCGKRGRRNYLKAHLRTH
NBR_0000204501-mRNA-1
C2H2 ZF
344
366
FTCETCERSFADGSTLRRHRLVH
NBR_0000204501-mRNA-1
C2H2 ZF
372
394
HSCPICGRGIARKDNVKSHIRSH
Links
Other
C2H2 ZF
family TFs
Other
Nippostrongylus brasiliensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_14853
Ancylostoma caninum
ANCCAN_14853
N
0.765
ANCCAN_22384
Ancylostoma caninum
ANCCAN_22384
N
0.765
HCOI00884700
Haemonchus contortus
HCOI00884700
N
0.827
HPBE_0002506301
Heligmosomoides bakeri
HPBE_0002506301
N
0.827
OESDEN_05517
Oesophagostomum dentatum
OESDEN_05517
N
0.765