CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g21894
(
Romanomermis culicivorax
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nRc.2.0.1.g21894
T155475_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t21894-RA
C2H2 ZF
192
214
FRCHICSKAFADKSNLRAHVQTH
nRc.2.0.1.t21894-RA
C2H2 ZF
220
241
FICHRCGKSFALKSYLSKHTES
Links
Other
C2H2 ZF
family TFs
Other
Romanomermis culicivorax
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAX37551
Xenopus laevis
AAX37551
N
CAA37753
Xenopus laevis
CAA37753
N
MYC
Anolis carolinensis
ENSACAG00000010372
N
ENSAMXG00000012024
Astyanax mexicanus
ENSAMXG00000012024
N
mycb
Danio rerio
ENSDARG00000007241
N
myca
Danio rerio
ENSDARG00000045695
N
myca
Gasterosteus aculeatus
ENSGACG00000004456
N
ENSLACG00000017161
Latimeria chalumnae
ENSLACG00000017161
N
ENSLOCG00000011270
Lepisosteus oculatus
ENSLOCG00000011270
N
ENSMEUG00000006124
Macropus eugenii
ENSMEUG00000006124
N
MYC
Monodelphis domestica
ENSMODG00000001735
N
ENSONIG00000006161
Oreochromis niloticus
ENSONIG00000006161
N
ENSPFOG00000013399
Poecilia formosa
ENSPFOG00000013399
N
ENSPFOG00000013425
Poecilia formosa
ENSPFOG00000013425
N
myca
Tetraodon nigroviridis
ENSTNIG00000017136
N
myc
Takifugu rubripes
ENSTRUG00000008797
N
ENSXMAG00000002025
Xiphophorus maculatus
ENSXMAG00000002025
N
Ogr06673
Ophisaurus gracilis
Ogr06673
N
Pvit_06106
Pogona vitticeps
Pvit_06106
N
myc.S
Xenopus laevis
XB-GENE-6053022
N
myc.L
Xenopus laevis
XB-GENE-6256575
N