SROB_0000697901 (Schistosoma rodhaini)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SROB_0000697901 T156921_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0000697901-mRNA-1 C2H2 ZF 32 54
SROB_0000697901-mRNA-1 C2H2 ZF 60 82
SROB_0000697901-mRNA-1 C2H2 ZF 88 110

Links

Other C2H2 ZF family TFs
Other Schistosoma rodhaini TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m008580 Ricinus communis 30128.m008580 I
BGIOSGA006371 Oryza indica BGIOSGA006371 I
BGIOSGA031911 Oryza indica BGIOSGA031911 N
Bostr.2983s0191 Boechera stricta Bostr.2983s0191 I
BRADI3G44520 Brachypodium distachyon BRADI3G44520 I
Cagra.0635s0013 Capsella grandiflora Cagra.0635s0013 I
Carubv10001008m.g Capsella rubella Carubv10001008m.g I
cassava21529.m1 Manihot esculenta cassava21529.m1 I
Eucgr.B03566 Eucalyptus grandis Eucgr.B03566 I
F775_04344 Aegilops tauschii F775_04344 I
AtIDD12 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6003159 I
GLYMA11G15950 Glycine max GLYMA11G15950 I
Gorai.005G198100 Gossypium raimondii Gorai.005G198100 I
id1 Zea mays GRMZM2G011357 D
GRMZM2G320287 Zea mays GRMZM2G320287 I
LPERR02G14730 Leersia perrieri LPERR02G14730 I
LPERR10G07370 Leersia perrieri LPERR10G07370 N
MTR_2g093960 Medicago truncatula MTR_2g093960 I
OB02G26130 Oryza brachyantha OB02G26130 I
OBART02G18320 Oryza barthii OBART02G18320 I
OBART10G10130 Oryza barthii OBART10G10130 N
OGLUM02G18620 Oryza glumaepatula OGLUM02G18620 I
OGLUM10G10050 Oryza glumaepatula OGLUM10G10050 N
OLONG_013811 Oryza longistaminata OLONG_013811 I
OMERI02G18510 Oryza meridionalis OMERI02G18510 I
OMERI10G07530 Oryza meridionalis OMERI10G07530 I
ONIVA02G20290 Oryza nivara ONIVA02G20290 I
ONIVA10G09540 Oryza nivara ONIVA10G09540 N
OPUNC02G16560 Oryza punctata OPUNC02G16560 I
OPUNC10G08850 Oryza punctata OPUNC10G08850 N
ORGLA02G0157900 Oryza glaberrima ORGLA02G0157900 I
ORGLA10G0088000 Oryza glaberrima ORGLA10G0088000 N
ORUFI02G19290 Oryza rufipogon ORUFI02G19290 I
ORUFI10G10700 Oryza rufipogon ORUFI10G10700 N
OS02G0518500 Oryza sativa OS02G0518500 I
OS10G0419200 Oryza sativa OS10G0419200 N
Pavir.Aa01904 Panicum virgatum Pavir.Aa01904 I
Pavir.Ab01787 Panicum virgatum Pavir.Ab01787 I
PGSC0003DMG400003372 Solanum tuberosum PGSC0003DMG400003372 I
PK25985.1 Cannabis sativa PK25985.1 I
POPTR_0001s12770 Populus trichocarpa POPTR_0001s12770 I
POPTR_0327s00220 Populus trichocarpa POPTR_0327s00220 I
SapurV1A.0444s0180 Salix purpurea SapurV1A.0444s0180 I
Sb04g021440 Sorghum bicolor Sb04g021440 I
Si019690m.g Setaria italica Si019690m.g I
Si036003m.g Setaria italica Si036003m.g I
Solyc06g075250.2 Solanum lycopersicum Solyc06g075250.2 I
TCM_008261 Theobroma cacao TCM_008261 I
Traes_4AS_F7A905B43 Triticum aestivum Traes_4AS_F7A905B43 I
Traes_4BL_38E55D7B4 Triticum aestivum Traes_4BL_38E55D7B4 I
Traes_4DL_DF1F43E16 Triticum aestivum Traes_4DL_DF1F43E16 I
TRIUR3_32694 Triticum urartu TRIUR3_32694 I
VIT_09s0054g01820 Vitis vinifera VIT_09s0054g01820 I