CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0001680401
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0001680401
T156964_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001680401-mRNA-1
C2H2 ZF
250
271
LRCDQCGKYYRNDYSLHHHICL
SROB_0001680401-mRNA-1
C2H2 ZF
293
315
YFCPSCRKPFKWLGNLTRHFYVH
SROB_0001680401-mRNA-1
C2H2 ZF
321
343
FRCDICSKEFFSAYQVKRHMNSH
SROB_0001680401-mRNA-1
C2H2 ZF
348
370
FKCEVCDKPFTCKYACAWHTRQH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bcin03g01530
Botrytis cinerea
Bcin03g01530
N
SS1G_00732
Sclerotinia sclerotiorum
SS1G_00732
N