CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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T265_08330
(
Opisthorchis viverrini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
T265_08330
T157551_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T265_08330
C2H2 ZF
194
218
YSCEYRNCGKVFFSRSSLFYHKQSH
T265_08330
C2H2 ZF
224
248
YICSHSGCSMRFVSESLLQAHNQLH
T265_08330
C2H2 ZF
260
284
FCCNYPSCNKVFICQDRLIEHIRVH
T265_08330
C2H2 ZF
290
314
YVCDHPGCSYRFARRGNLFAHKRVH
T265_08330
C2H2 ZF
323
347
YHCVHPGCGKTFLYTRSLTEHMNVH
T265_08330
C2H2 ZF
353
377
YRCDYPNCDKSFTSKSYLHAHRRIH
Links
Other
C2H2 ZF
family TFs
Other
Opisthorchis viverrini
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA011447
Oryza indica
BGIOSGA011447
N
OGLUM03G03680
Oryza glumaepatula
OGLUM03G03680
N
OLONG_020838
Oryza longistaminata
OLONG_020838
N
OMERI07G01690
Oryza meridionalis
OMERI07G01690
N
ONIVA03G03550
Oryza nivara
ONIVA03G03550
N
OPUNC03G03490
Oryza punctata
OPUNC03G03490
N
ORGLA03G0035600
Oryza glaberrima
ORGLA03G0035600
N
ORUFI03G03520
Oryza rufipogon
ORUFI03G03520
N
OS03G0148800
Oryza sativa
OS03G0148800
N