TMUE_s0065001300 (Trichuris muris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TMUE_s0065001300 T157906_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.778 0.870
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.778 0.870
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.778 0.870
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.777 0.884
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.777 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TMUE_s0065001300 C2H2 ZF 169 191
TMUE_s0065001300 C2H2 ZF 197 219
TMUE_s0065001300 C2H2 ZF 225 247
TMUE_s0065001300 C2H2 ZF 253 275
TMUE_s0065001300 C2H2 ZF 281 303
TMUE_s0065001300 C2H2 ZF 309 332

Links

Other C2H2 ZF family TFs
Other Trichuris muris TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001033 Aedes aegypti AAEL001033 N 0.000
CPIJ007224 Culex quinquefasciatus CPIJ007224 N 0.000
CpipJ_CPIJ007224 Culex pipiens CpipJ_CPIJ007224 N 0.000
LDEC018179 Leptinotarsa decemlineata LDEC018179 N 0.000
MCINX005293 Melitaea cinxia MCINX005293 N 0.000
RPRC012768 Rhodnius prolixus RPRC012768 N 0.000
TC003775 Tribolium castaneum TC003775 N 0.000