CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh2_pg.C_1230031
(
Branchiostoma floridae
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
estExt_fgenesh2_pg.C_1230031
T159486_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1230031
C2HC ZF
660
689
GCPTPGCKGIGHIKGPKYSGHHSSFGCPYS
estExt_fgenesh2_pg.C_1230031
C2HC ZF
728
756
KCPTPGCDGSGHVTGKYTAHHRVSGCPLA
Links
Other
C2HC ZF
family TFs
Other
Branchiostoma floridae
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pc21g12810
Penicillium chrysogenum
Pc21g12810
N
0.000
PCH_Pc21g12810
Penicillium rubens
PCH_Pc21g12810
N
0.000
PEX1_057760
Penicillium expansum
PEX1_057760
N
0.000
PITC_024470
Penicillium italicum
PITC_024470
N
0.000