SVE_1935100 (Strongyloides venezuelensis)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 SVE_1935100 T159686_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.912 0.912
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVE_1935100.1 C2HC ZF 214 241
SVE_1935100.1 C2HC ZF 260 288

Links

Other C2HC ZF family TFs
Other Strongyloides venezuelensis TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB05384.1 Alternaria brassicicola AB05384.1 I
ARB_02172 Arthroderma benhamiae ARB_02172 I
AUEXF2481DRAFT_6481 Aureobasidium subglaciale AUEXF2481DRAFT_6481 I
ANIA_00951 Aspergillus nidulans CADANIAG00001701 D
COCC4DRAFT_52892 Bipolaris maydis COCC4DRAFT_52892 I
COCCADRAFT_202 Bipolaris zeicola COCCADRAFT_202 I
COCMIDRAFT_22848 Bipolaris oryzae COCMIDRAFT_22848 I
COCSADRAFT_34697 Bipolaris sorokiniana COCSADRAFT_34697 I
COCVIDRAFT_24689 Bipolaris victoriae COCVIDRAFT_24689 I
estExt_fgenesh1_pg.C_80141 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_80141 I
estExt_fgenesh1_pg.C_chr_20607 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_20607 I
F503_00378 Ophiostoma piceae uamh F503_00378 I
GMDG_00083 Pseudogymnoascus destructans GMDG_00083 I
GSTUM_00008508001 Tuber melanosporum GSTUM_00008508001 I
H101_07555 Trichophyton interdigitale H101_07555 I
H102_00527 Trichophyton rubrum H102_00527 I
H105_00515 Trichophyton soudanense H105_00515 I
M437DRAFT_37789 Aureobasidium melanogenum M437DRAFT_37789 I
M438DRAFT_349765 Aureobasidium pullulans M438DRAFT_349765 I
MBM_01879 Marssonina brunnea MBM_01879 I
MCYG_00012 Arthroderma otae MCYG_00012 I
MCYG_00012 Microsporum canis MCYG_00012 I
MGYG_07213 Microsporum gypseum MGYG_07213 I
Mycgr3G108163 Zymoseptoria tritici Mycgr3G108163 I
PDE_00114 Penicillium oxalicum PDE_00114 I
SETTUDRAFT_163914 Setosphaeria turcica SETTUDRAFT_163914 I
TEQG_08786 Trichophyton equinum TEQG_08786 I
TRV_00423 Trichophyton verrucosum TRV_00423 I
UREG_02910 Uncinocarpus reesii UREG_02910 I
V499_07882 Pseudogymnoascus pannorum V499_07882 I