nfya (Danio rerio)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 ENSDARG00000042004 T159909_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		0.982 0.982
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		0.982 0.982
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		0.982 0.982
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		0.982 0.982
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		0.982 0.982
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		0.982 0.982
HAP2
M08452_2.00 		Saccharomyces cerevisiae
TTGGH
DCCAA		 COMPILED
Mathelier et al.(2014)
MA0313.1 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000090345 CBF/NF-Y 231 286
ENSDARP00000093838 CBF/NF-Y 231 286
ENSDARP00000106116 CBF/NF-Y 256 311
ENSDARP00000120414 CBF/NF-Y 129 184

Links

Other CBF/NF-Y family TFs
Other Danio rerio TFs

460 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009092 Aedes aegypti AAEL009092 N
AALB003420 Anopheles albimanus AALB003420 N
AARA002212 Anopheles arabiensis AARA002212 N
AATE002410 Anopheles atroparvus AATE002410 N
ACHR009221 Anopheles christyi ACHR009221 N
ACYPI008958 Acyrthosiphon pisum ACYPI008958 N
ADAC010420 Anopheles darlingi ADAC010420 N
AFAF012002 Anopheles farauti AFAF012002 N
Afo_R008528 Aptenodytes forsteri Afo_R008528 N
AGAP001761 Anopheles gambiae AGAP001761 N
Alligator_sinensis_CCG000180.1 Alligator sinensis Alligator_sinensis_CCG000180.1 N
AMEC017514 Anopheles melas AMEC017514 N
AMEM008456 Anopheles merus AMEM008456 N
AQUA000629 Anopheles quadriannulatus AQUA000629 N
Cflo_01607--XP_001123059.1_APIME Camponotus floridanus Cflo_01607--XP_001123059.1_APIME N
CLEC001936 Cimex lectularius CLEC001936 N
CPIJ012963 Culex quinquefasciatus CPIJ012963 N
CpipJ_CPIJ012963 Culex pipiens CpipJ_CPIJ012963 N
DAPPUDRAFT_220106 Daphnia pulex DAPPUDRAFT_220106 N
ENSAMXG00000012483 Astyanax mexicanus ENSAMXG00000012483 N
cers3b Danio rerio ENSDARG00000036337 N
ENSGACG00000002760 Gasterosteus aculeatus ENSGACG00000002760 N
ENSLOCG00000004390 Lepisosteus oculatus ENSLOCG00000004390 N
ENSMICG00000014767 Microcebus murinus ENSMICG00000014767 N
ENSONIG00000017329 Oreochromis niloticus ENSONIG00000017329 N
ENSONIG00000019701 Oreochromis niloticus ENSONIG00000019701 N
CERS5 Oryzias latipes ENSORLG00000010219 N
ENSPFOG00000013551 Poecilia formosa ENSPFOG00000013551 N
ENSSHAG00000001540 Sarcophilus harrisii ENSSHAG00000001540 N
ENSSHAG00000001747 Sarcophilus harrisii ENSSHAG00000001747 N
ENSSHAG00000003870 Sarcophilus harrisii ENSSHAG00000003870 N
estExt_gwp.C_860189 Branchiostoma floridae estExt_gwp.C_860189 N
e_gw.479.83.1 Branchiostoma floridae e_gw.479.83.1 N
HelroG82517 Helobdella robusta HelroG82517 N
HHAL005214-PA Halyomorpha halys HHAL005214-PA N
HMEL006147 Heliconius melpomene HMEL006147 N
Hsal_14209--XP_001123059.1_APIME Harpegnathos saltator Hsal_14209--XP_001123059.1_APIME N
KGM_15429 Danaus plexippus KGM_15429 N
KGM_16996 Danaus plexippus KGM_16996 N
L798_00373 Zootermopsis nevadensis L798_00373 N
LDEC003623 Leptinotarsa decemlineata LDEC003623 N
LotgiG226091 Lottia gigantea LotgiG226091 N
MCINX005366 Melitaea cinxia MCINX005366 N
MCINX005367 Melitaea cinxia MCINX005367 N
Ogr00854 Ophisaurus gracilis Ogr00854 N
RPRC008736 Rhodnius prolixus RPRC008736 N
SINV20227 Solenopsis invicta SINV20227 N
SINV24013 Solenopsis invicta SINV24013 N
cers3.L Xenopus laevis XB-GENE-6251639 N
YQE_11876 Dendroctonus ponderosae YQE_11876 N