NFYA (Sus scrofa)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 ENSSSCG00000001611 T159952_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		1.000 1.000
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		1.000 1.000
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		1.000 1.000
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		1.000 1.000
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		1.000 1.000
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		1.000 1.000
HAP2
M08452_2.00 		Saccharomyces cerevisiae
TTGGH
DCCAA		 COMPILED
Mathelier et al.(2014)
MA0313.1 		0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000001745 CBF/NF-Y 257 312

Links

Other CBF/NF-Y family TFs
Other Sus scrofa TFs

462 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29848.m004464 Ricinus communis 29848.m004464 I
30076.m004648 Ricinus communis 30076.m004648 I
30174.m008663 Ricinus communis 30174.m008663 I
30190.m011276 Ricinus communis 30190.m011276 I
Al_scaffold_0008_399 Arabidopsis lyrata Al_scaffold_0008_399 I
Al_scaffold_0008_414 Arabidopsis lyrata Al_scaffold_0008_414 I
Aquca_039_00057 Aquilegia coerulea Aquca_039_00057 I
WRKY65 Arabidopsis thaliana AT1G29280 D
WRKY22 Arabidopsis thaliana AT4G01250 D
WRKY27 Arabidopsis thaliana AT5G52830 D
BGIOSGA000826 Oryza indica BGIOSGA000826 I
BGIOSGA007926 Oryza indica BGIOSGA007926 I
BGIOSGA017063 Oryza indica BGIOSGA017063 I
BGIOSGA027404 Oryza indica BGIOSGA027404 I
Bo2g047450 Brassica oleracea Bo2g047450 I
Bo5g058590 Brassica oleracea Bo5g058590 I
Bo9g003610 Brassica oleracea Bo9g003610 I
Bostr.10064s0007 Boechera stricta Bostr.10064s0007 I
Bostr.15697s0224 Boechera stricta Bostr.15697s0224 I
Bostr.7305s0070 Boechera stricta Bostr.7305s0070 I
Bra022612 Brassica rapa Bra022612 I
Bra032300 Brassica rapa Bra032300 I
Bra037368 Brassica rapa Bra037368 I
BRADI3G09810 Brachypodium distachyon BRADI3G09810 I
BRADI3G18580 Brachypodium distachyon BRADI3G18580 I
BRADI5G20700 Brachypodium distachyon BRADI5G20700 I
Cagra.0084s0027 Capsella grandiflora Cagra.0084s0027 I
Cagra.3517s0048 Capsella grandiflora Cagra.3517s0048 I
Carubv10001446m.g Capsella rubella Carubv10001446m.g I
Carubv10010013m.g Capsella rubella Carubv10010013m.g I
Carubv10026599m.g Capsella rubella Carubv10026599m.g I
cassava2367.valid.m1 Manihot esculenta cassava2367.valid.m1 I
cassava23784.valid.m1 Manihot esculenta cassava23784.valid.m1 I
cassava39274.m1 Manihot esculenta cassava39274.m1 I
cassava39359.m1 Manihot esculenta cassava39359.m1 I
cassava40183.m1 Manihot esculenta cassava40183.m1 I
cassava44233.m1 Manihot esculenta cassava44233.m1 I
cassava46457.m1 Manihot esculenta cassava46457.m1 I
cassava7246.valid.m1 Manihot esculenta cassava7246.valid.m1 I
Ca_00420 Cicer arietinum Ca_00420 I
Ca_05782 Cicer arietinum Ca_05782 I
Ca_06167 Cicer arietinum Ca_06167 I
Ca_06984 Cicer arietinum Ca_06984 I
Ca_10993 Cicer arietinum Ca_10993 I
Ca_17759 Cicer arietinum Ca_17759 I
Ca_22099 Cicer arietinum Ca_22099 I
chr1.LjT16J16.70.nd Lotus japonicus chr1.LjT16J16.70.nd I
chr4.CM0244.470.nc Lotus japonicus chr4.CM0244.470.nc I
chr4.CM0501.200.nd Lotus japonicus chr4.CM0501.200.nd I
Ciclev10008836m.g Citrus clementina Ciclev10008836m.g I
Ciclev10016229m.g Citrus clementina Ciclev10016229m.g I
Ciclev10020943m.g Citrus clementina Ciclev10020943m.g I
Cla019157 Citrullus lanatus Cla019157 I
Cla019945 Citrullus lanatus Cla019945 I
Cla021523 Citrullus lanatus Cla021523 I
Cucsa.106960 Cucumis sativus Cucsa.106960 I
Cucsa.212870 Cucumis sativus Cucsa.212870 I
Cucsa.258700 Cucumis sativus Cucsa.258700 I
Eucgr.D02324 Eucalyptus grandis Eucgr.D02324 I
Eucgr.E00098 Eucalyptus grandis Eucgr.E00098 I
Eucgr.E02783 Eucalyptus grandis Eucgr.E02783 I
Eucgr.K01151 Eucalyptus grandis Eucgr.K01151 I
evm.TU.supercontig_7.92 Carica papaya evm.TU.supercontig_7.92 I
F775_17869 Aegilops tauschii F775_17869 I
F775_19032 Aegilops tauschii F775_19032 I
F775_43334 Aegilops tauschii F775_43334 I
WRKY65 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002596 I
WRKY22 Arabidopsis lyrata fgenesh2_kg.6__3581__AT4G01250.1 I
WRKY27 Arabidopsis lyrata fgenesh2_kg.8__1163__AT5G52830.1 I
gene02269-v1.0-hybrid Fragaria vesca gene02269-v1.0-hybrid I
gene08720-v1.0-hybrid Fragaria vesca gene08720-v1.0-hybrid I
gene19019-v1.0-hybrid Fragaria vesca gene19019-v1.0-hybrid I
GLYMA01G43130 Glycine max GLYMA01G43130 I
GLYMA04G08060 Glycine max GLYMA04G08060 I
GLYMA05G37390 Glycine max GLYMA05G37390 I
GLYMA08G02160 Glycine max GLYMA08G02160 I
GLYMA09G06980 Glycine max GLYMA09G06980 I
GLYMA09G39040 Glycine max GLYMA09G39040 I
GLYMA12G33990 Glycine max GLYMA12G33990 I
GLYMA13G36540 Glycine max GLYMA13G36540 I
GLYMA14G17730 Glycine max GLYMA14G17730 I
GLYMA16G03570 Glycine max GLYMA16G03570 I
GLYMA17G29190 Glycine max GLYMA17G29190 I
GLYMA18G47300 Glycine max GLYMA18G47300 I
Gorai.001G002200 Gossypium raimondii Gorai.001G002200 I
Gorai.004G160100 Gossypium raimondii Gorai.004G160100 I
Gorai.007G103400 Gossypium raimondii Gorai.007G103400 I
Gorai.008G273700 Gossypium raimondii Gorai.008G273700 I
GRMZM2G038158 Zea mays GRMZM2G038158 I
GRMZM2G048450 Zea mays GRMZM2G048450 I
GRMZM2G071907 Zea mays GRMZM2G071907 I
GRMZM2G091331 Zea mays GRMZM2G091331 I
GSMUA_Achr4G08360_001 Musa acuminata GSMUA_Achr4G08360_001 I
GSMUA_Achr5G21910_001 Musa acuminata GSMUA_Achr5G21910_001 I
GSMUA_Achr7G15930_001 Musa acuminata GSMUA_Achr7G15930_001 I
LPERR01G26540 Leersia perrieri LPERR01G26540 I
LPERR02G09570 Leersia perrieri LPERR02G09570 I
LPERR04G20020 Leersia perrieri LPERR04G20020 I
Lus10007907.g Linum usitatissimum Lus10007907.g I
Lus10020136.g Linum usitatissimum Lus10020136.g I
Lus10026936.g Linum usitatissimum Lus10026936.g I
Lus10032303.g Linum usitatissimum Lus10032303.g I
Lus10036399.g Linum usitatissimum Lus10036399.g I
MDP0000185288 Malus domestica MDP0000185288 I
MDP0000200748 Malus domestica MDP0000200748 I
MDP0000202292 Malus domestica MDP0000202292 I
MDP0000272940 Malus domestica MDP0000272940 I
MDP0000294489 Malus domestica MDP0000294489 I
MDP0000304113 Malus domestica MDP0000304113 I
MDP0000381897 Malus domestica MDP0000381897 I
MDP0000602139 Malus domestica MDP0000602139 I
MDP0000716551 Malus domestica MDP0000716551 I
MDP0000909869 Malus domestica MDP0000909869 I
MDP0000946614 Malus domestica MDP0000946614 I
mgf001721m Mimulus guttatus mgf001721m I
mgf007569m Mimulus guttatus mgf007569m I
mgf017068m Mimulus guttatus mgf017068m I
mgf017547m Mimulus guttatus mgf017547m I
MLOC_22106 Hordeum vulgare MLOC_22106 I
MLOC_66612 Hordeum vulgare MLOC_66612 I
MTR_1g009613 Medicago truncatula MTR_1g009613 I
MTR_2g016770 Medicago truncatula MTR_2g016770 I
MTR_2g083870 Medicago truncatula MTR_2g083870 I
MTR_4g127040 Medicago truncatula MTR_4g127040 I
MTR_7g079040 Medicago truncatula MTR_7g079040 I
MTR_7g109600 Medicago truncatula MTR_7g109600 I
MTR_8g028565 Medicago truncatula MTR_8g028565 I
MTR_8g087000 Medicago truncatula MTR_8g087000 I
MTR_8g098945 Medicago truncatula MTR_8g098945 I
OB01G39870 Oryza brachyantha OB01G39870 I
OB02G20150 Oryza brachyantha OB02G20150 I
OBART01G30930 Oryza barthii OBART01G30930 I
OBART02G11480 Oryza barthii OBART02G11480 I
OBART04G24360 Oryza barthii OBART04G24360 I
OBART08G06920 Oryza barthii OBART08G06920 I
OGLUM01G35080 Oryza glumaepatula OGLUM01G35080 I
OGLUM02G11370 Oryza glumaepatula OGLUM02G11370 I
OGLUM04G24300 Oryza glumaepatula OGLUM04G24300 I
OGLUM08G07550 Oryza glumaepatula OGLUM08G07550 I
OLONG_007204 Oryza longistaminata OLONG_007204 I
OLONG_014051 Oryza longistaminata OLONG_014051 I
OMERI01G28060 Oryza meridionalis OMERI01G28060 I
OMERI02G12140 Oryza meridionalis OMERI02G12140 I
OMERI04G20100 Oryza meridionalis OMERI04G20100 I
OMERI08G06880 Oryza meridionalis OMERI08G06880 I
OMERI10G14590 Oryza meridionalis OMERI10G14590 I
ONIVA01G35310 Oryza nivara ONIVA01G35310 I
ONIVA02G12780 Oryza nivara ONIVA02G12780 I
ONIVA04G23530 Oryza nivara ONIVA04G23530 I
ONIVA08G07380 Oryza nivara ONIVA08G07380 I
OPUNC01G29980 Oryza punctata OPUNC01G29980 I
OPUNC04G21880 Oryza punctata OPUNC04G21880 I
orange1.1g019126m.g Citrus sinensis orange1.1g019126m.g I
orange1.1g019404m.g Citrus sinensis orange1.1g019404m.g I
orange1.1g022353m.g Citrus sinensis orange1.1g022353m.g I
ORGLA01G0253700 Oryza glaberrima ORGLA01G0253700 I
ORGLA02G0103000 Oryza glaberrima ORGLA02G0103000 I
ORGLA04G0209200 Oryza glaberrima ORGLA04G0209200 I
ORGLA08G0060600 Oryza glaberrima ORGLA08G0060600 I
ORUFI01G34080 Oryza rufipogon ORUFI01G34080 I
ORUFI02G11490 Oryza rufipogon ORUFI02G11490 I
ORUFI04G26070 Oryza rufipogon ORUFI04G26070 I
ORUFI08G08070 Oryza rufipogon ORUFI08G08070 I
OS01G0750100 Oryza sativa OS01G0750100 I
OS02G0265200 Oryza sativa OS02G0265200 I
OS04G0605100 Oryza sativa OS04G0605100 I
OS08G0235800 Oryza sativa OS08G0235800 I
Pavir.Ea02735 Panicum virgatum Pavir.Ea02735 I
Pavir.Eb01390 Panicum virgatum Pavir.Eb01390 I
Pavir.Eb03138 Panicum virgatum Pavir.Eb03138 I
Pavir.Gb00763 Panicum virgatum Pavir.Gb00763 I
Pavir.J30274 Panicum virgatum Pavir.J30274 I
PGSC0003DMG400000064 Solanum tuberosum PGSC0003DMG400000064 I
PGSC0003DMG400020432 Solanum tuberosum PGSC0003DMG400020432 I
PK09209.1 Cannabis sativa PK09209.1 I
PK14075.1 Cannabis sativa PK14075.1 I
PK29806.1 Cannabis sativa PK29806.1 I
Pm005052 Prunus mume Pm005052 I
Pm010616 Prunus mume Pm010616 I
Pm014006 Prunus mume Pm014006 I
Pm018219 Prunus mume Pm018219 I
Pm020069 Prunus mume Pm020069 I
POPTR_0001s09900 Populus trichocarpa POPTR_0001s09900 I
POPTR_0002s16590 Populus trichocarpa POPTR_0002s16590 I
POPTR_0003s13250 Populus trichocarpa POPTR_0003s13250 I
POPTR_0014s08600 Populus trichocarpa POPTR_0014s08600 I
POPTR_0018s03450 Populus trichocarpa POPTR_0018s03450 I
PRUPE_ppa007745mg Prunus persica PRUPE_ppa007745mg I
PRUPE_ppa008846mg Prunus persica PRUPE_ppa008846mg I
PRUPE_ppa010217mg Prunus persica PRUPE_ppa010217mg I
PRUPE_ppa025586mg Prunus persica PRUPE_ppa025586mg I
SapurV1A.0013s1050 Salix purpurea SapurV1A.0013s1050 I
SapurV1A.0029s0340 Salix purpurea SapurV1A.0029s0340 I
SapurV1A.0098s0400 Salix purpurea SapurV1A.0098s0400 I
SapurV1A.0099s0300 Salix purpurea SapurV1A.0099s0300 I
SapurV1A.0119s0210 Salix purpurea SapurV1A.0119s0210 I
SapurV1A.0180s0230 Salix purpurea SapurV1A.0180s0230 I
Sb04g009800 Sorghum bicolor Sb04g009800 I
Sb06g027710 Sorghum bicolor Sb06g027710 I
Si010545m.g Setaria italica Si010545m.g I
Si017529m.g Setaria italica Si017529m.g I
Solyc01g095100.2 Solanum lycopersicum Solyc01g095100.2 I
Solyc07g055280.2 Solanum lycopersicum Solyc07g055280.2 I
Solyc10g011910.2 Solanum lycopersicum Solyc10g011910.2 I
TCM_005261 Theobroma cacao TCM_005261 I
TCM_036832 Theobroma cacao TCM_036832 I
Thhalv10013872m.g Eutrema salsugineum Thhalv10013872m.g I
Thhalv10028843m.g Eutrema salsugineum Thhalv10028843m.g I
Traes_2AL_15A7BB684 Triticum aestivum Traes_2AL_15A7BB684 I
Traes_2BL_6B75B32E3 Triticum aestivum Traes_2BL_6B75B32E3 I
Traes_2DL_F600B5FDF Triticum aestivum Traes_2DL_F600B5FDF I
Traes_5BL_8688F70C9 Triticum aestivum Traes_5BL_8688F70C9 I
TRIUR3_20596 Triticum urartu TRIUR3_20596 I
TRIUR3_21369 Triticum urartu TRIUR3_21369 I
WRKY29 Vitis vinifera VIT_02s0025g00420 I
WRKY22 Vitis vinifera VIT_15s0046g02190 I
WRKY27 Vitis vinifera VIT_16s0050g01480 I