GGTG_12878 (Gaeumannomyces graminis)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 GGTG_12878 T160002_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAP2
M08452_2.00 		Saccharomyces cerevisiae
TTGGH
DCCAA		 COMPILED
Mathelier et al.(2014)
MA0313.1 		0.768 0.768
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GGTG_12878T0 CBF/NF-Y 202 258
GGTG_12878T1 CBF/NF-Y 202 258

Links

Other CBF/NF-Y family TFs
Other Gaeumannomyces graminis TFs

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA025404 Oryza indica BGIOSGA025404 N
OBART07G07520 Oryza barthii OBART07G07520 N
OGLUM07G07210 Oryza glumaepatula OGLUM07G07210 N
ONIVA07G06070 Oryza nivara ONIVA07G06070 N
OPUNC07G07230 Oryza punctata OPUNC07G07230 N
ORUFI07G07520 Oryza rufipogon ORUFI07G07520 N