SMU15024997 (Schmidtea mediterranea)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 SMU15024997 T160788_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		0.821 0.821
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		0.821 0.821
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		0.821 0.821
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		0.821 0.821
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		0.821 0.821
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		0.821 0.821
HAP2
M08452_2.00 		Saccharomyces cerevisiae
TTGGH
DCCAA		 COMPILED
Mathelier et al.(2014)
MA0313.1 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15024997 CBF/NF-Y 105 160

Links

Other CBF/NF-Y family TFs
Other Schmidtea mediterranea TFs

464 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AACERI_AaceriAFR531W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR531W I
CaO19.12426 Candida albicans CaO19.12426 N
CaO19.4961 Candida albicans CaO19.4961 N
CORT_0D02790 Candida orthopsilosis CORT_0D02790 I
CTRG_03608 Candida tropicalis CTRG_03608 N
DEHA2E16478g Debaryomyces hansenii DEHA2E16478g I
Ecym_1475 Eremothecium cymbalariae Ecym_1475 I
estExt_fgenesh1_pg.C_chr_1.20297 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20297 I
G210_3672 Candida maltosa G210_3672 N
GNLVRS01_PISO0M20868g Millerozyma farinosa GNLVRS01_PISO0M20868g I
GNLVRS01_PISO0N21111g Millerozyma farinosa GNLVRS01_PISO0N21111g I
JL09_g1496 Pichia kudriavzevii JL09_g1496 N
KUCA_T00002785001 Kuraishia capsulata KUCA_T00002785001 I
PICST_66679 Scheffersomyces stipitis PICST_66679 I
YALI0_E24937g Yarrowia lipolytica YALI0_E24937g N