CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_03917
(
Coccidioides immitis
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04218 (CENP-B_N)
IPR006695
CIMG_03917
T160936_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU00392
M01898_2.00
Neurospora crassa
YGTCACAY
RTGTGACR
PBM
Weirauch et al.(2014)
pTH9311
0.720
0.720
NCU00392
M01899_2.00
Neurospora crassa
NRTCACNN
NNGTGAYN
PBM
Weirauch et al.(2014)
pTH9658
0.720
0.720
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_03917T0
CENPB
112
163
TPRRTLTDADRRRMCMYHEENPHVKQTEIGAMFGVERSTVSKVLRQKEKYLY
Links
Other
CENPB
family TFs
Other
Coccidioides immitis
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP10597
Atta cephalotes
ACEP10597
N
0.000
ACYPI004761
Acyrthosiphon pisum
ACYPI004761
N
0.000
Cflo_12870--XP_392775.3_APIME
Camponotus floridanus
Cflo_12870--XP_392775.3_APIME
N
0.000
CLEC000289
Cimex lectularius
CLEC000289
N
0.000
Jarid2
Drosophila melanogaster
FBgn0036004
N
0.000
moj32
Drosophila mojavensis
FBgn0085089
N
0.000
GF25139
Drosophila ananassae
FBgn0102131
N
0.000
GG15383
Drosophila erecta
FBgn0107635
N
0.000
GH15241
Drosophila grimshawi
FBgn0122716
N
0.000
GL17885
Drosophila persimilis
FBgn0155488
N
0.000
GM25154
Drosophila sechellia
FBgn0180015
N
0.000
GD14188
Drosophila simulans
FBgn0185875
N
0.000
GJ12176
Drosophila virilis
FBgn0199428
N
0.000
GK20560
Drosophila willistoni
FBgn0222556
N
0.000
GE20846
Drosophila yakuba
FBgn0238137
N
0.000
GA28524
Drosophila pseudoobscura
FBgn0249884
N
0.000
GB42496
Apis mellifera
GB42496
N
0.000
HHAL003867-PA
Halyomorpha halys
HHAL003867-PA
N
0.000
Hsal_01820--XP_392775.3_APIME
Harpegnathos saltator
Hsal_01820--XP_392775.3_APIME
N
0.000
L798_13115
Zootermopsis nevadensis
L798_13115
N
0.000
LCUP016068
Lucilia cuprina
LCUP016068
N
0.000
LLOJ005184
Lutzomyia longipalpis
LLOJ005184
N
0.000
LotgiG235330
Lottia gigantea
LotgiG235330
N
0.000
MDOA013705
Musca domestica
MDOA013705
N
0.000
NV17158
Nasonia vitripennis
NV17158
N
0.000
Ocbimv22039568m.g
Octopus bimaculoides
Ocbimv22039568m.g
N
0.000
PHUM538030
Pediculus humanus
PHUM538030
N
0.000
PPAI002885
Phlebotomus papatasi
PPAI002885
N
0.000
SINV22538
Solenopsis invicta
SINV22538
N
0.000
SMAR007072
Strigamia maritima
SMAR007072
N
0.000
TC002791
Tribolium castaneum
TC002791
N
0.000