CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CUP2
(
Saccharomyces cerevisiae
)
Copper fist
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00649 (Copper-fist)
IPR001083
YGL166W
T164130_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CUP2
M08453_2.00
Saccharomyces cerevisiae
CWTTTYYGCTG
CAGCRRAAAWG
COMPILED
Mathelier et al.(2014)
MA0287.1
(Direct)
(Direct)
CUP2
M08549_2.00
Saccharomyces cerevisiae
TCTTTTGCTG
CAGCAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.1
(Direct)
(Direct)
CUP2
M08550_2.00
Saccharomyces cerevisiae
TCTTTTTGCTG
CAGCAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.2
(Direct)
(Direct)
CUP2
M08551_2.00
Saccharomyces cerevisiae
TCTTTTTTGCTG
CAGCAAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.3
(Direct)
(Direct)
CUP2
M10408_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CUP2_Q4
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAA1
M08553_2.00
Saccharomyces cerevisiae
SMGGSG
CSCCKS
Misc
DeBoer et al.(2011)
YPR008W_1425
0.718
0.718
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YGL166W
Copper fist
2
40
VVINGVKYACETCIRGHRAAQCTHTDGPLQMIRRKGRPS
Links
Other
Copper fist
family TFs
Other
Saccharomyces cerevisiae
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
22312_YPR008W
Saccharomyces mikatae
22312_YPR008W
I
0.718
23384_YPR008W
Saccharomyces paradoxus
23384_YPR008W
I
0.718
25568_YPR008W
Saccharomyces bayanus
25568_YPR008W
I
0.718
7226_YGL166W
Saccharomyces mikatae
7226_YGL166W
I
0.974
8357_YGL166W
Saccharomyces bayanus
8357_YGL166W
I
0.974
AACERI_AaceriAEL295C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAEL295C
I
0.718
AGOS_AEL295C
Ashbya gossypii
AGOS_AEL295C
I
0.718
BN7_4399
Wickerhamomyces ciferrii
BN7_4399
I
0.718
CAGL0L09339g
Candida glabrata
CAGL0L09339g
I
0.718
CLUG_03246
Candida lusitaniae
CLUG_03246
I
0.718
CLUG_03246
Clavispora lusitaniae
CLUG_03246
I
0.718
DEHA2D05500g
Debaryomyces hansenii
DEHA2D05500g
I
0.744
Ecym_6116
Eremothecium cymbalariae
Ecym_6116
I
0.718
estExt_fgenesh1_pg.C_chr_1.20386
Pichia stipitis
estExt_fgenesh1_pg.C_chr_1.20386
I
0.744
GNLVRS01_PISO0A06138g
Millerozyma farinosa
GNLVRS01_PISO0A06138g
I
0.744
GNLVRS01_PISO0B06205g
Millerozyma farinosa
GNLVRS01_PISO0B06205g
I
0.744
HPODL_01037
Ogataea parapolymorpha
HPODL_01037
I
0.718
JL09_g2035
Pichia kudriavzevii
JL09_g2035
I
0.769
JL09_g5487
Pichia kudriavzevii
JL09_g5487
I
0.769
KLLA0_A03047g
Kluyveromyces lactis
KLLA0_A03047g
I
0.744
KNAG_0D02340
Kazachstania naganishii
KNAG_0D02340
I
0.718
Kpol_541p30
Vanderwaltozyma polyspora
Kpol_541p30
I
0.769
LELG_03555
Lodderomyces elongisporus
LELG_03555
I
0.744
NCAS_0B05730
Naumovozyma castellii
NCAS_0B05730
I
0.744
NDAI_0B03070
Naumovozyma dairenensis
NDAI_0B03070
I
0.744
PAS_chr3_0232
Komagataella pastoris
PAS_chr3_0232
I
0.769
PGUG_05595
Candida guilliermondii
PGUG_05595
I
0.718
PGUG_05595
Meyerozyma guilliermondii
PGUG_05595
I
0.718
PICST_66716
Scheffersomyces stipitis
PICST_66716
I
0.744
SAKL0B03344g
Lachancea kluyveri
SAKL0B03344g
I
0.744
Scas_Contig710.11
Saccharomyces castellii
Scas_Contig710.11
I
0.744
SKUD_166403
Saccharomyces kudriavzevii
SKUD_166403
I
0.718
SU7_1098
Saccharomyces arboricola
SU7_1098
I
0.974
SU7_3622
Saccharomyces arboricola
SU7_3622
I
0.718
TBLA_0C00170
Tetrapisispora blattae
TBLA_0C00170
I
0.769
TDEL_0C01350
Torulaspora delbrueckii
TDEL_0C01350
I
0.718
TPHA_0D00690
Tetrapisispora phaffii
TPHA_0D00690
I
0.718
XP_002492448.1
Pichia pastoris
XP_002492448.1
I
0.769
HAA1
Saccharomyces cerevisiae
YPR008W
D
0.718
ZBAI_01494
Zygosaccharomyces bailii
ZBAI_01494
I
0.744
ZYRO0F04862g
Zygosaccharomyces rouxii
ZYRO0F04862g
I
0.744