CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CSP2
(
Arabidopsis thaliana
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00313 (CSD)
IPR002059
AT4G38680
T164272_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CSP4
M01902_2.00
Arabidopsis thaliana
AAWAAAAM
KTTTTWTT
PBM
Weirauch et al.(2014)
pTH7494
0.879
0.879
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G38680.1
CSD
11
77
RKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNRPKAIDVSGP
Links
Other
CSD
family TFs
Other
Arabidopsis thaliana
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TSTA_002980
Talaromyces stipitatus
TSTA_002980
N
TSTA_008370
Talaromyces stipitatus
TSTA_008370
N
TSTA_009130
Talaromyces stipitatus
TSTA_009130
N
TSTA_013450
Talaromyces stipitatus
TSTA_013450
N
TSTA_022990
Talaromyces stipitatus
TSTA_022990
N
TSTA_025810
Talaromyces stipitatus
TSTA_025810
N
TSTA_029420
Talaromyces stipitatus
TSTA_029420
N
TSTA_035660
Talaromyces stipitatus
TSTA_035660
N
TSTA_050400
Talaromyces stipitatus
TSTA_050400
N
TSTA_059810
Talaromyces stipitatus
TSTA_059810
N
TSTA_069180
Talaromyces stipitatus
TSTA_069180
N
TSTA_080510
Talaromyces stipitatus
TSTA_080510
N
TSTA_080940
Talaromyces stipitatus
TSTA_080940
N
TSTA_086330
Talaromyces stipitatus
TSTA_086330
N
TSTA_088580
Talaromyces stipitatus
TSTA_088580
N
TSTA_093940
Talaromyces stipitatus
TSTA_093940
N
TSTA_097920
Talaromyces stipitatus
TSTA_097920
N
TSTA_098060
Talaromyces stipitatus
TSTA_098060
N
TSTA_107220
Talaromyces stipitatus
TSTA_107220
N
TSTA_124040
Talaromyces stipitatus
TSTA_124040
N
TSTA_125380
Talaromyces stipitatus
TSTA_125380
N
TSTA_125400
Talaromyces stipitatus
TSTA_125400
N