BGIBMGA000526 (Bombyx mori)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 BGIBMGA000526 T164278_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.833 0.833
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.833 0.833
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.833 0.833
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.833 0.833
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.788 0.788
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA000526-TA CSD 38 107

Links

Other CSD family TFs
Other Bombyx mori TFs

341 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01405 Capronia coronata A1O1_01405 N
A1O5_11371 Cladophialophora psammophila A1O5_11371 N
A1O7_01283 Cladophialophora yegresii A1O7_01283 N
COCSADRAFT_21263 Bipolaris sorokiniana COCSADRAFT_21263 N
estExt_Genewise1Plus.C_10560 Mycosphaerella fijiensis estExt_Genewise1Plus.C_10560 N
fgenesh1_pg.sca_1_chr1_3_0001388 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0001388 N
G647_01344 Cladophialophora carrionii G647_01344 N
HMPREF1120_00436 Exophiala dermatitidis HMPREF1120_00436 N
MYCFIDRAFT_54726 Pseudocercospora fijiensis MYCFIDRAFT_54726 N
NechaG75777 Fusarium solani NechaG75777 N
OIDMADRAFT_189260 Oidiodendron maius OIDMADRAFT_189260 N
OIDMADRAFT_74156 Oidiodendron maius OIDMADRAFT_74156 N
PFICI_11615 Pestalotiopsis fici PFICI_11615 N
PV07_06220 Cladophialophora immunda PV07_06220 N
SNOG_01186 Phaeosphaeria nodorum SNOG_01186 N
SNOG_01186 Stagonospora nodorum SNOG_01186 N
VDAG_09064 Verticillium dahliae VDAG_09064 N
VHEMI04633 Torrubiella hemipterigena VHEMI04633 N
VHEMI05472 Torrubiella hemipterigena VHEMI05472 N
Z517_03673 Fonsecaea pedrosoi Z517_03673 N
Z518_10649 Rhinocladiella mackenziei Z518_10649 N