LIN28B (Anolis carolinensis)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSACAG00000003957 T164412_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LIN28B
M04663_2.00 		Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX 		0.955 0.955
LIN28B
M04664_2.00 		Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX 		0.955 0.955
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000003851 CSD 49 121

Links

Other CSD family TFs
Other Anolis carolinensis TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009427 Calypte anna Aan_R009427 N
Afo_R001646 Aptenodytes forsteri Afo_R001646 N
Alligator_sinensis_CCG019717.1 Alligator sinensis Alligator_sinensis_CCG019717.1 N
Brh_R006914 Buceros rhinoceros Brh_R006914 N
ENSAPLG00000016383 Anas platyrhynchos ENSAPLG00000016383 N
ENSFALG00000001465 Ficedula albicollis ENSFALG00000001465 N
ENSMGAG00000005982 Meleagris gallopavo ENSMGAG00000005982 N
ENSPSIG00000006033 Pelodiscus sinensis ENSPSIG00000006033 N
ENSTGUG00000005125 Taeniopygia guttata ENSTGUG00000005125 N
Gfo_R008001 Geospiza fortis Gfo_R008001 N
Tal_R000196 Tyto alba Tal_R000196 N