YBX2 (Equus caballus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSECAG00000009996 T164528_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.985 0.985
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.985 0.985
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.985 0.985
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.985 0.985
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.803 0.803
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000007975 CSD 19 88

Links

Other CSD family TFs
Other Equus caballus TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BOTBODRAFT_138635 Botryobasidium botryosum BOTBODRAFT_138635 N 0.000
CERSUDRAFT_119740 Ceriporiopsis subvermispora CERSUDRAFT_119740 N 0.000
EPUS_00435 Endocarpon pusillum EPUS_00435 N 0.000
estExt_fgenesh3_kg.C_170048 Heterobasidion annosum estExt_fgenesh3_kg.C_170048 N 0.000
estExt_fgeneshMC_pg.C_50901 Mucor circinelloides estExt_fgeneshMC_pg.C_50901 N 0.000
estExt_fgeneshPB_pg.C_390043 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_390043 N 0.000
estExt_Genewise1.C_80993 Neurospora discreta estExt_Genewise1.C_80993 I 0.000
F503_06755 Ophiostoma piceae uamh F503_06755 I 0.000
FIBRA_02145 Fibroporia radiculosa FIBRA_02145 N 0.000
GLOTRDRAFT_62199 Gloeophyllum trabeum GLOTRDRAFT_62199 N 0.000
HETIRDRAFT_439816 Heterobasidion irregulare HETIRDRAFT_439816 N 0.000
HYDPIDRAFT_117261 Hydnomerulius pinastri HYDPIDRAFT_117261 N 0.000
K443DRAFT_683891 Laccaria amethystina K443DRAFT_683891 N 0.000
K443DRAFT_683893 Laccaria amethystina K443DRAFT_683893 N 0.000
K443DRAFT_685043 Laccaria amethystina K443DRAFT_685043 N 0.000
LACBIDRAFT_296682 Laccaria bicolor LACBIDRAFT_296682 I 0.000
LACBIDRAFT_296690 Laccaria bicolor LACBIDRAFT_296690 N 0.000
LACBIDRAFT_315220 Laccaria bicolor LACBIDRAFT_315220 N 0.000
LACBIDRAFT_317921 Laccaria bicolor LACBIDRAFT_317921 I 0.000
M404DRAFT_1005658 Pisolithus tinctorius M404DRAFT_1005658 I 0.000
M413DRAFT_412939 Hebeloma cylindrosporum M413DRAFT_412939 N 0.000
Moror_3407 Moniliophthora roreri Moror_3407 I 0.000
PAXINDRAFT_172061 Paxillus involutus PAXINDRAFT_172061 N 0.000
PAXRUDRAFT_153943 Paxillus rubicundulus PAXRUDRAFT_153943 N 0.000
PILCRDRAFT_789690 Piloderma croceum PILCRDRAFT_789690 N 0.000
PVAR5_3766 Byssochlamys spectabilis PVAR5_3766 I 0.000
SCHCODRAFT_269951 Schizophyllum commune SCHCODRAFT_269951 N 0.000
SERLA73DRAFT_65877 Serpula lacrymans SERLA73DRAFT_65877 I 0.000
SPBR_06572 Sporothrix brasiliensis SPBR_06572 I 0.000
VDAG_08177 Verticillium dahliae VDAG_08177 I 0.000
VDBG_08512 Verticillium alfalfae VDBG_08512 I 0.000
VDBG_08512 Verticillium albo atrum VDBG_08512 I 0.000
WALSEDRAFT_58028 Wallemia sebi WALSEDRAFT_58028 N 0.000