ENSSSCG00000022235 (Sus scrofa)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSSSCG00000022235 T164794_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.797 0.797
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.797 0.797
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.797 0.797
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.797 0.797
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000005878 CSD 43 110
ENSSSCP00000023742 CSD 55 122

Links

Other CSD family TFs
Other Sus scrofa TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004205 Calypte anna Aan_R004205 N
Cmyd_10002198 Chelonia mydas Cmyd_10002198 N
HELT Anolis carolinensis ENSACAG00000002389 N
ENSAMXG00000000740 Astyanax mexicanus ENSAMXG00000000740 N
HELT Bos taurus ENSBTAG00000014704 N
ENSBTAP00000019570-D1 Bos grunniens ENSBTAP00000019570-D1 N
HELT Canis familiaris ENSCAFG00000007599 N
HELT Callithrix jacchus ENSCJAG00000005863 N
helt Danio rerio ENSDARG00000056400 N
HELT Dasypus novemcinctus ENSDNOG00000011225 N
HELT Equus caballus ENSECAG00000008629 N
ENSFALG00000011825 Ficedula albicollis ENSFALG00000011825 N
HELT Felis catus ENSFCAG00000025140 N
HELT Homo sapiens ENSG00000187821 N
helt Gasterosteus aculeatus ENSGACG00000017707 N
ENSGMOG00000012454 Gadus morhua ENSGMOG00000012454 N
ENSLACG00000001871 Latimeria chalumnae ENSLACG00000001871 N
HELT Loxodonta africana ENSLAFG00000017721 N
ENSLOCG00000013768 Lepisosteus oculatus ENSLOCG00000013768 N
HELT Myotis lucifugus ENSMLUG00000004406 N
HELT Monodelphis domestica ENSMODG00000004628 N
ENSMPUG00000011138 Mustela putorius furo ENSMPUG00000011138 N
Helt Mus musculus ENSMUSG00000047171 N
ENSOARG00000007647 Ovis aries ENSOARG00000007647 N
ENSONIG00000017593 Oreochromis niloticus ENSONIG00000017593 N
helt Oryzias latipes ENSORLG00000019546 N
ENSPFOG00000002530 Poecilia formosa ENSPFOG00000002530 N
HELT Pan troglodytes ENSPTRG00000016645 N
Helt Rattus norvegicus ENSRNOG00000010785 N
ENSSHAG00000004636 Sarcophilus harrisii ENSSHAG00000004636 N
ENSSTOG00000009054 Ictidomys tridecemlineatus ENSSTOG00000009054 N
HELT Taeniopygia guttata ENSTGUG00000006754 N
helt Takifugu rubripes ENSTRUG00000017593 N
ENSXMAG00000005631 Xiphophorus maculatus ENSXMAG00000005631 N
Ogr17354 Ophisaurus gracilis Ogr17354 N
Pvit_12333 Pogona vitticeps Pvit_12333 N
XP_002934312 Xenopus tropicalis XP_002934312 N