GB54355 (Apis mellifera)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 GB54355 T164916_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.864 0.864
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.864 0.864
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.864 0.864
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.864 0.864
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.818 0.818
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB54355-PA CSD 24 93

Links

Other CSD family TFs
Other Apis mellifera TFs

345 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF746 Bos taurus ENSBTAG00000031106 N
ZNF746 Choloepus hoffmanni ENSCHOG00000005920 N
ZNF746 Callithrix jacchus ENSCJAG00000010276 N
ENSCPOG00000012471 Cavia porcellus ENSCPOG00000012471 N
ENSCSAG00000006985 Chlorocebus sabaeus ENSCSAG00000006985 N
ZNF746 Dasypus novemcinctus ENSDNOG00000040375 N
Zfp746 Dipodomys ordii ENSDORG00000006388 N
ZNF746 Homo sapiens ENSG00000181220 N
ZNF746 Gorilla gorilla ENSGGOG00000015841 N
ZNF746 Loxodonta africana ENSLAFG00000006725 N
ZNF746 Microcebus murinus ENSMICG00000006405 N
ZNF746 Myotis lucifugus ENSMLUG00000017109 N
ENSMMUG00000018707 Macaca mulatta ENSMMUG00000018707 N
Zfp746 Mus musculus ENSMUSG00000057691 N
ENSNLEG00000003735 Nomascus leucogenys ENSNLEG00000003735 N
ZNF746 Oryctolagus cuniculus ENSOCUG00000008431 N
ZNF746 Otolemur garnettii ENSOGAG00000028106 N
ZNF746 Ochotona princeps ENSOPRG00000010592 N
ENSPANG00000017316 Papio anubis ENSPANG00000017316 N
ZNF746 Pteropus vampyrus ENSPVAG00000010875 N
Zfp746 Rattus norvegicus ENSRNOG00000007064 N
ENSSSCG00000016776 Sus scrofa ENSSSCG00000016776 N
ENSSTOG00000021079 Ictidomys tridecemlineatus ENSSTOG00000021079 N
ENSTBEG00000001361 Tupaia belangeri ENSTBEG00000001361 N
ZNF746 Tursiops truncatus ENSTTRG00000002642 N
Myotis_brandtii_ZNF746_10025634 Myotis brandtii Myotis_brandtii_ZNF746_10025634 N