CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Smp_097750
(
Schistosoma mansoni
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00313 (CSD)
IPR002059
Smp_097750
T165155_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smp_097750
M01208_2.00
Schistosoma mansoni
TAGATAGA
TCTATCTA
PBM
Lambert et al.(2019)
pTH7807
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.712
0.712
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01208_2.00
CSD
18
87
VRGVVKWFNVKAGYGFITRSDTSSDIFVHQTAISRNNPGKMQRSLQENEEVEFFVVEGDKGVEASDVTGP
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_097750.1:pep
CSD
18
87
VRGVVKWFNVKAGYGFITRSDTSSDIFVHQTAISRNNPGKMQRSLQENEEVEFFVVEGDKGVEASDVTGP
Links
Other
CSD
family TFs
Other
Schistosoma mansoni
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy