CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_220029
(
Coccomyxa subellipsoidea C169
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
estExt_fgenesh1_pg.C_220029
T165435_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
49156
CSD
89
126
LQGFVDHVREHFGFIRVPQASDLVFFHISAVQSAEGPA
49156
CSD
276
324
ENGRRLFLTFEGTDVKGRTGRLNKGDPVQFLITTDMRTGKKRATQVQRG
49156
CSD
337
402
EQGFVDKFMNTYGFVRSIEREGQPPLFFHISEVADSSASEVAPGAEVAFSAAADPTGKLIAVALEL
49156
CSD
440
477
MNVEEDAAAALGPEDEVEFTVVANRRTGSFRAETVELL
49156
CSD
485
559
ELGQIKQLKESKEPGGGFGFIRACERASDVFFHFSQLSGVSSSELAPGEDVEFSVSREPLPDAPKRIVAQRVTRA
49156
CSD
678
738
KTGRIFSFKGTFGFLEYELESPKPPRLYFHASDVEGNVQLRPGDEVTFTVANRPPRAEGPD
Links
Other
CSD
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action