CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000225222
(
Malus domestica
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
MDP0000225222
T165472_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000225222
CSD
5
71
LSGTVKWFNDQKGFGFITPNDGGEDLFVHQSSIRSEGFRTLGDGETVEYTIEEDAGGRTKAVDVTGP
Links
Other
CSD
family TFs
Other
Malus domestica
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CMQ_7998
Grosmannia clavigera
CMQ_7998
N
0.000
estExt_fgeneshTM_pg.C_10542
Tremella mesenterica
estExt_fgeneshTM_pg.C_10542
N
0.000
fgenesh1_pg.C_scaffold_11000089
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000089
N
0.000
HMPREF1624_00309
Sporothrix schenckii
HMPREF1624_00309
N
0.000
HPODL_02662
Ogataea parapolymorpha
HPODL_02662
N
0.000
K437DRAFT_66818
Tilletiaria anomala
K437DRAFT_66818
N
0.000
MAC_03708
Metarhizium acridum
MAC_03708
N
0.000
MAJ_01270
Metarhizium majus
MAJ_01270
N
0.000
MBR_01289
Metarhizium brunneum
MBR_01289
N
0.000
MCOS_0000664501
Mesocestoides corti
MCOS_0000664501
N
0.000
Moror_8439
Moniliophthora roreri
Moror_8439
N
0.000
MPER_12197
Moniliophthora perniciosa
MPER_12197
N
0.000
MVLG_01553
Microbotryum violaceum
MVLG_01553
N
0.000
PAS_chr3_1149
Komagataella pastoris
PAS_chr3_1149
N
0.000
RHTO_04537
Rhodosporidium toruloides
RHTO_04537
N
0.000
SAKL0C03872g
Lachancea kluyveri
SAKL0C03872g
N
0.000
SAKL0C03916g
Lachancea kluyveri
SAKL0C03916g
N
0.000
SAKL0D09922g
Lachancea kluyveri
SAKL0D09922g
N
0.000
SPBR_07296
Sporothrix brasiliensis
SPBR_07296
N
0.000
TRIVIDRAFT_119706
Trichoderma virens
TRIVIDRAFT_119706
N
0.000
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
0.000
X797_001779
Metarhizium robertsii
X797_001779
N
0.000
XP_002492281.1
Pichia pastoris
XP_002492281.1
N
0.000