CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sjc_0001400
(
Schistosoma japonicum
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
Sjc_0001400
T165539_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smp_097750
M01208_2.00
Schistosoma mansoni
TAGATAGA
TCTATCTA
PBM
Lambert et al.(2019)
pTH7807
0.864
0.864
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.712
0.712
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000000132
CSD
26
95
VKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGDKGDEASEVTGP
Links
Other
CSD
family TFs
Other
Schistosoma japonicum
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy