CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGAP008935
(
Anopheles gambiae
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
AGAP008935
T165978_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.855
0.855
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.855
0.855
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.771
0.771
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.771
0.771
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.771
0.771
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.771
0.771
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.771
0.771
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.771
0.771
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.771
0.771
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.771
0.771
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.771
0.771
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.771
0.771
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.771
0.771
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.771
0.771
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.771
0.771
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP008935-PA
CSL
84
215
IVILHAKVAQKSYGNEKRFFCPPPCIYLFGEGWRLRKEQMLRRGESEQSTQLCAFIGIGSPEQEMQPLDLNNPKQYCAAKTLFISDSDKRKHFMLSVKMFYGSGHDIGVFQSKRIKVISKPSKKKQSLKNAD
Links
Other
CSL
family TFs
Other
Anopheles gambiae
TFs
162 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACUA008027
Anopheles culicifacies
ACUA008027
N
AMAM002480
Anopheles maculatus
AMAM002480
N
AMIN008664
Anopheles minimus
AMIN008664
N
A_03823
Schistosoma haematobium
A_03823
N
Brh_R002088
Buceros rhinoceros
Brh_R002088
N
CGI_10021531
Crassostrea gigas
CGI_10021531
N
csin106540
Clonorchis sinensis
csin106540
N
D915_01091
Fasciola hepatica
D915_01091
N
DILT_0001089701
Diphyllobothrium latum
DILT_0001089701
N
ECANG7_04410
Echinococcus canadensis
ECANG7_04410
N
EFV57612
Trichinella spiralis
EFV57612
N
EFV57661
Trichinella spiralis
EFV57661
N
EmuJ_001187700
Echinococcus multilocularis
EmuJ_001187700
N
swi/snf
Ciona intestinalis
ENSCING00000004110
N
ENSCSAVG00000004620
Ciona savignyi
ENSCSAVG00000004620
N
ENSEEUG00000014927
Erinaceus europaeus
ENSEEUG00000014927
N
ENSGGOG00000012841
Gorilla gorilla
ENSGGOG00000012841
N
ENSPMAG00000007461
Petromyzon marinus
ENSPMAG00000007461
N
SMARCA1
Pteropus vampyrus
ENSPVAG00000003805
N
Smarca5
Rattus norvegicus
ENSRNOG00000021584
N
ENSSHAG00000013518
Sarcophilus harrisii
ENSSHAG00000013518
N
ENSTGUG00000015201
Taeniopygia guttata
ENSTGUG00000015201
N
ENSTSYG00000004240
Tarsius syrichta
ENSTSYG00000004240
N
ENSVPAG00000010492
Vicugna pacos
ENSVPAG00000010492
N
estExt_fgenesh2_pm.C_2200002
Branchiostoma floridae
estExt_fgenesh2_pm.C_2200002
N
HDID_0000819001
Hymenolepis diminuta
HDID_0000819001
N
HelroG101736
Helobdella robusta
HelroG101736
N
HmN_000065900
Hymenolepis microstoma
HmN_000065900
N
HNAJ_0000675501
Hymenolepis nana
HNAJ_0000675501
N
L798_15354
Zootermopsis nevadensis
L798_15354
N
LDEC005088
Leptinotarsa decemlineata
LDEC005088
N
LotgiG182249
Lottia gigantea
LotgiG182249
N
Ocbimv22035363m.g
Octopus bimaculoides
Ocbimv22035363m.g
N
Sakowv30022101m.g
Saccoglossus kowalevskii
Sakowv30022101m.g
N
scaffold164-EXSNAP2012.18
Pristionchus exspectatus
scaffold164-EXSNAP2012.18
N
SCUD_0000101601
Schistosoma curassoni
SCUD_0000101601
N
Sjc_0053770
Schistosoma japonicum
Sjc_0053770
N
SMAR014171
Strigamia maritima
SMAR014171
N
Smp_008830
Schistosoma mansoni
Smp_008830
N
SMRZ_0002157401
Schistosoma margrebowiei
SMRZ_0002157401
N
SMU15038703
Schmidtea mediterranea
SMU15038703
N
SPER_0000373001
Spirometra erinaceieuropaei
SPER_0000373001
N
SPER_0002845401
Spirometra erinaceieuropaei
SPER_0002845401
N
SPU_016575
Strongylocentrotus purpuratus
SPU_016575
N
T265_00769
Opisthorchis viverrini
T265_00769
N
tetur03g08660
Tetranychus urticae
tetur03g08660
N
TsM_000501300
Taenia solium
TsM_000501300
N
TTAC_0000153401
Hydatigera taeniaeformis
TTAC_0000153401
N
YQE_02907
Dendroctonus ponderosae
YQE_02907
N