CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GI13259
(
Drosophila mojavensis
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
FBgn0136016
T166152_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.985
0.985
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.985
0.985
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.786
0.786
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.786
0.786
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.786
0.786
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.786
0.786
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.786
0.786
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.786
0.786
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.786
0.786
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.786
0.786
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.786
0.786
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.786
0.786
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.786
0.786
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.786
0.786
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.786
0.786
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0162476
CSL
126
256
IVILHAKVAQKSYGNEKRFFCPPPCIYLFGSGWQRRYQEMLQQGEGEQGAQLCAFIGIGSSDQDMQQLDLNGKQYCAAKTLFISDSDKRKHFMLSVKMFYGNGHDIGVFNSKRIKVISKPSKKKQSLKNAD
Links
Other
CSL
family TFs
Other
Drosophila mojavensis
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_12051
Ascaris suum
ASU_12051
N
0.000
Bm4897
Brugia malayi
Bm4897
N
0.000
BTMF_0000429201
Brugia timori
BTMF_0000429201
I
0.714
DICVIV_03671
Dictyocaulus viviparus
DICVIV_03671
N
0.000
RBPJ
Homo sapiens
ENSG00000168214
D
0.875
EVEC_0000876601
Enterobius vermicularis
EVEC_0000876601
N
0.000
GPLIN_001569000
Globodera pallida
GPLIN_001569000
I
0.765
HCOI00218000
Haemonchus contortus
HCOI00218000
N
0.000
HCOI01422600
Haemonchus contortus
HCOI01422600
N
0.000
HPLM_0000748001
Haemonchus placei
HPLM_0000748001
N
0.000
OESDEN_00868
Oesophagostomum dentatum
OESDEN_00868
N
0.000
RSKR_0000739700
Rhabditophanes kr3021
RSKR_0000739700
N
0.000
SPAL_0001149300
Strongyloides papillosus
SPAL_0001149300
N
0.000
SSTP_0000504800
Strongyloides stercoralis
SSTP_0000504800
N
0.000
SVE_1985500
Strongyloides venezuelensis
SVE_1985500
N
0.000
TCLT_0000154801
Thelazia callipaeda
TCLT_0000154801
N
0.000
WBGene00242124
Onchocerca volvulus
WBGene00242124
N
0.000