GA25242 (Drosophila pseudoobscura)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 FBgn0246623 T166158_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		1.000 1.000
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		1.000 1.000
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.794 0.794
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.794 0.794
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.794 0.794
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.794 0.794
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.794 0.794
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.794 0.794
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.794 0.794
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.794 0.794
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.794 0.794
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.794 0.794
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.794 0.794
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.794 0.794
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0279010 CSL 119 249

Links

Other CSL family TFs
Other Drosophila pseudoobscura TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TIGD3 Bos taurus ENSBTAG00000003079 N
ENSBTAP00000004005-D1 Bos grunniens ENSBTAP00000004005-D1 N
TIGD3 Canis familiaris ENSCAFG00000013628 N
TIGD3 Callithrix jacchus ENSCJAG00000022193 N
TIGD3 Cavia porcellus ENSCPOG00000009317 N
ENSCSAG00000019171 Chlorocebus sabaeus ENSCSAG00000019171 N
TIGD3 Dasypus novemcinctus ENSDNOG00000004634 N
TIGD3 Equus caballus ENSECAG00000006896 N
TIGD3 Felis catus ENSFCAG00000025695 N
TIGD3 Homo sapiens ENSG00000173825 N
TIGD3 Gorilla gorilla ENSGGOG00000014762 N
ENSLACG00000012827 Latimeria chalumnae ENSLACG00000012827 N
TIGD3 Myotis lucifugus ENSMLUG00000003893 N
TIGD3 Macaca mulatta ENSMMUG00000019165 N
ENSMPUG00000019988 Mustela putorius furo ENSMPUG00000019988 N
Tigd3 Mus musculus ENSMUSG00000044390 N
TIGD3 Oryctolagus cuniculus ENSOCUG00000026984 N
TIGD3 Otolemur garnettii ENSOGAG00000027212 N
ENSP00000377805 Macaca fascicularis ENSP00000377805 N
ENSPANG00000006957 Papio anubis ENSPANG00000006957 N
ENSPPYG00000003068 Pongo abelii ENSPPYG00000003068 N
ENSPSIG00000001900 Pelodiscus sinensis ENSPSIG00000001900 N
TIGD3 Pan troglodytes ENSPTRG00000003873 N
Tigd3 Rattus norvegicus ENSRNOG00000023318 N
TIGD3 Sorex araneus ENSSARG00000009391 N
ENSSHAG00000003566 Sarcophilus harrisii ENSSHAG00000003566 N
TIGD3 Sus scrofa ENSSSCG00000012994 N
ENSSTOG00000024637 Ictidomys tridecemlineatus ENSSTOG00000024637 N
TIGD3 Tupaia belangeri ENSTBEG00000008871 N
ENSVPAG00000009110 Vicugna pacos ENSVPAG00000009110 N