CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMODG00000012065
(
Monodelphis domestica
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSMODG00000012065
T168100_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
1.000
1.000
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.979
0.979
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.894
0.894
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
BGIBMGA012843
M01907_2.00
Bombyx mori
NNCGCGTANVNN
NNBNTACGCGNN
PBM
Weirauch et al.(2014)
pTH9239
0.766
0.766
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.723
0.723
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000031447
CxxC
11
57
GARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQC
Links
Other
CxxC
family TFs
Other
Monodelphis domestica
TFs
248 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_10050001
Branchiostoma floridae
estExt_fgenesh2_pg.C_10050001
N
estExt_fgenesh2_pg.C_10050002
Branchiostoma floridae
estExt_fgenesh2_pg.C_10050002
N
estExt_fgenesh2_pg.C_10050003
Branchiostoma floridae
estExt_fgenesh2_pg.C_10050003
N
estExt_fgenesh2_pg.C_1010105
Branchiostoma floridae
estExt_fgenesh2_pg.C_1010105
N
estExt_fgenesh2_pg.C_1360008
Branchiostoma floridae
estExt_fgenesh2_pg.C_1360008
N
estExt_fgenesh2_pg.C_160025
Branchiostoma floridae
estExt_fgenesh2_pg.C_160025
N
estExt_fgenesh2_pg.C_2150032
Branchiostoma floridae
estExt_fgenesh2_pg.C_2150032
N
estExt_fgenesh2_pg.C_460129
Branchiostoma floridae
estExt_fgenesh2_pg.C_460129
N
estExt_fgenesh2_pg.C_520015
Branchiostoma floridae
estExt_fgenesh2_pg.C_520015
N
estExt_fgenesh2_pg.C_5580012
Branchiostoma floridae
estExt_fgenesh2_pg.C_5580012
N
estExt_fgenesh2_pg.C_5860001
Branchiostoma floridae
estExt_fgenesh2_pg.C_5860001
N
estExt_fgenesh2_pg.C_7160018
Branchiostoma floridae
estExt_fgenesh2_pg.C_7160018
N
estExt_fgenesh2_pg.C_7360007
Branchiostoma floridae
estExt_fgenesh2_pg.C_7360007
N
estExt_fgenesh2_pg.C_750143
Branchiostoma floridae
estExt_fgenesh2_pg.C_750143
N
estExt_fgenesh2_pg.C_960136
Branchiostoma floridae
estExt_fgenesh2_pg.C_960136
N
fgenesh2_pg.scaffold_1639000001
Branchiostoma floridae
fgenesh2_pg.scaffold_1639000001
N
fgenesh2_pg.scaffold_268000051
Branchiostoma floridae
fgenesh2_pg.scaffold_268000051
N
fgenesh2_pg.scaffold_308000052
Branchiostoma floridae
fgenesh2_pg.scaffold_308000052
N
fgenesh2_pg.scaffold_32000031
Branchiostoma floridae
fgenesh2_pg.scaffold_32000031
N
fgenesh2_pg.scaffold_32000086
Branchiostoma floridae
fgenesh2_pg.scaffold_32000086
N
fgenesh2_pg.scaffold_354000013
Branchiostoma floridae
fgenesh2_pg.scaffold_354000013
N
fgenesh2_pg.scaffold_354000015
Branchiostoma floridae
fgenesh2_pg.scaffold_354000015
N
fgenesh2_pg.scaffold_440000023
Branchiostoma floridae
fgenesh2_pg.scaffold_440000023
N
fgenesh2_pg.scaffold_55000124
Branchiostoma floridae
fgenesh2_pg.scaffold_55000124
N
fgenesh2_pg.scaffold_58000023
Branchiostoma floridae
fgenesh2_pg.scaffold_58000023
N
fgenesh2_pg.scaffold_624000032
Branchiostoma floridae
fgenesh2_pg.scaffold_624000032
N
fgenesh2_pg.scaffold_72000003
Branchiostoma floridae
fgenesh2_pg.scaffold_72000003
N