CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000004862
(
Pelodiscus sinensis
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSPSIG00000004862
T168261_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
1.000
1.000
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.979
0.979
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.894
0.894
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
BGIBMGA012843
M01907_2.00
Bombyx mori
NNCGCGTANVNN
NNBNTACGCGNN
PBM
Weirauch et al.(2014)
pTH9239
0.766
0.766
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.723
0.723
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000005255
CxxC
568
614
GARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQC
Links
Other
CxxC
family TFs
Other
Pelodiscus sinensis
TFs
248 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bcin02g08310
Botrytis cinerea
Bcin02g08310
N
0.000
CFIO01_08071
Colletotrichum fioriniae
CFIO01_08071
N
0.000
CGGC5_3607
Colletotrichum gloeosporioides
CGGC5_3607
N
0.000
CH063_08900
Colletotrichum higginsianum
CH063_08900
N
0.000
Cob_05888
Colletotrichum orbiculare
Cob_05888
N
0.000
CSUB01_01660
Colletotrichum sublineola
CSUB01_01660
N
0.000
estExt_Genewise1.C_100108
Cryphonectria parasitica
estExt_Genewise1.C_100108
N
0.000
estExt_Genewise1Plus.C_120277
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_120277
N
0.000
FFUJ_13620
Fusarium fujikuroi
FFUJ_13620
N
0.000
fgenesh1_pm.sca_3_chr4_2_0000036
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000036
N
0.000
FGRRES_06382
Fusarium graminearum
FGRRES_06382
N
0.000
FPSE_05827
Fusarium pseudograminearum
FPSE_05827
N
0.000
GGTG_05245
Gaeumannomyces graminis
GGTG_05245
N
0.000
GLRG_06776
Colletotrichum graminicola
GLRG_06776
N
0.000
GMDG_04399
Pseudogymnoascus destructans
GMDG_04399
N
0.000
MAC_07589
Metarhizium acridum
MAC_07589
N
0.000
MAJ_08773
Metarhizium majus
MAJ_08773
N
0.000
MANI_028863
Metarhizium anisopliae
MANI_028863
N
0.000
MAPG_03623
Magnaporthe poae
MAPG_03623
N
0.000
MBR_08228
Metarhizium brunneum
MBR_08228
N
0.000
MGG_09562
Magnaporthe oryzae
MGG_09562
N
0.000
MGU_03399
Metarhizium guizhouense
MGU_03399
N
0.000
MYCFIDRAFT_155566
Pseudocercospora fijiensis
MYCFIDRAFT_155566
N
0.000
NechaG92421
Fusarium solani
NechaG92421
N
0.000
OCS_00747
Ophiocordyceps sinensis
OCS_00747
N
0.000
OCS_04593
Ophiocordyceps sinensis
OCS_04593
N
0.000
PFICI_03549
Pestalotiopsis fici
PFICI_03549
N
0.000
PV09_03404
Verruconis gallopava
PV09_03404
N
0.000
SAPIO_CDS4519
Scedosporium apiospermum
SAPIO_CDS4519
N
0.000
SBOR_2961
Sclerotinia borealis
SBOR_2961
N
0.000
TRIATDRAFT_293053
Trichoderma atroviride
TRIATDRAFT_293053
N
0.000
TRIREDRAFT_60897
Trichoderma reesei
TRIREDRAFT_60897
N
0.000
TRIVIDRAFT_74205
Trichoderma virens
TRIVIDRAFT_74205
N
0.000
UCREL1_9565
Eutypa lata
UCREL1_9565
N
0.000
V499_02769
Pseudogymnoascus pannorum
V499_02769
N
0.000
VDAG_09459
Verticillium dahliae
VDAG_09459
N
0.000
VHEMI08999
Torrubiella hemipterigena
VHEMI08999
N
0.000
X797_000968
Metarhizium robertsii
X797_000968
N
0.000
X797_003516
Metarhizium robertsii
X797_003516
N
0.000