CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Fbxl19
(
Rattus norvegicus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSRNOG00000018986
T168291_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.915
0.915
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.872
0.872
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.872
0.872
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000059635
CxxC
11
57
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
ENSRNOP00000075629
CxxC
11
57
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Rattus norvegicus
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R004132
Calypte anna
Aan_R004132
N
Afo_R000303
Aptenodytes forsteri
Afo_R000303
N
Brh_R003060
Buceros rhinoceros
Brh_R003060
N
ENSAPLG00000010735
Anas platyrhynchos
ENSAPLG00000010735
N
NFXL1
Bos taurus
ENSBTAG00000002201
N
NFXL1
Canis familiaris
ENSCAFG00000001913
N
NFXL1
Callithrix jacchus
ENSCJAG00000018893
N
NFXL1
Cavia porcellus
ENSCPOG00000014371
N
ENSCSAG00000017157
Chlorocebus sabaeus
ENSCSAG00000017157
N
nfxl1
Danio rerio
ENSDARG00000070127
N
NFXL1
Dasypus novemcinctus
ENSDNOG00000037969
N
NFXL1
Erinaceus europaeus
ENSEEUG00000003714
N
ENSFALG00000003060
Ficedula albicollis
ENSFALG00000003060
N
NFXL1
Felis catus
ENSFCAG00000031403
N
NFXL1
Homo sapiens
ENSG00000170448
N
NFXL1
Gorilla gorilla
ENSGGOG00000008489
N
ENSLACG00000002228
Latimeria chalumnae
ENSLACG00000002228
N
NFXL1
Loxodonta africana
ENSLAFG00000014027
N
ENSLOCG00000012003
Lepisosteus oculatus
ENSLOCG00000012003
N
NFXL1
Meleagris gallopavo
ENSMGAG00000012041
N
NFXL1
Myotis lucifugus
ENSMLUG00000008367
N
ENSMMUG00000021780
Macaca mulatta
ENSMMUG00000021780
N
NFXL1
Monodelphis domestica
ENSMODG00000020621
N
ENSMPUG00000005201
Mustela putorius furo
ENSMPUG00000005201
N
Nfxl1
Mus musculus
ENSMUSG00000072889
N
ENSNLEG00000017372
Nomascus leucogenys
ENSNLEG00000017372
N
ENSOARG00000016535
Ovis aries
ENSOARG00000016535
N
NFXL1
Oryctolagus cuniculus
ENSOCUG00000008876
N
NFXL1
Otolemur garnettii
ENSOGAG00000006702
N
ENSONIG00000005464
Oreochromis niloticus
ENSONIG00000005464
N
ENSP00000370949
Macaca fascicularis
ENSP00000370949
N
ENSP00000370949-D1
Bos grunniens
ENSP00000370949-D1
N
ENSPANG00000025042
Papio anubis
ENSPANG00000025042
N
ENSPPYG00000014711
Pongo abelii
ENSPPYG00000014711
N
ENSPSIG00000010167
Pelodiscus sinensis
ENSPSIG00000010167
N
NFXL1
Pan troglodytes
ENSPTRG00000016035
N
NFXL1
Pteropus vampyrus
ENSPVAG00000011462
N
Nfxl1
Rattus norvegicus
ENSRNOG00000058588
N
ENSSHAG00000002875
Sarcophilus harrisii
ENSSHAG00000002875
N
NFXL1
Sus scrofa
ENSSSCG00000008816
N
NFXL1
Taeniopygia guttata
ENSTGUG00000008171
N
nfxl1
Tetraodon nigroviridis
ENSTNIG00000000336
N
Gfo_R010405
Geospiza fortis
Gfo_R010405
N
Myotis_brandtii_NFXL1_10022858
Myotis brandtii
Myotis_brandtii_NFXL1_10022858
N
Tal_R006254
Tyto alba
Tal_R006254
N