CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NEMVEDRAFT_v1g242923
(
Nematostella vectensis
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
NEMVEDRAFT_v1g242923
T168487_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.766
0.766
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.766
0.766
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.745
0.745
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.723
0.723
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO41168
CxxC
562
608
GVRRRRTRCGQCEACTREDCGECRTCKDMKKFGGPGRMKQSCTKRAC
Links
Other
CxxC
family TFs
Other
Nematostella vectensis
TFs
158 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.12230
Candida albicans
CaO19.12230
N
0.000
CaO19.4766
Candida albicans
CaO19.4766
N
0.000
CD36_08580
Candida dubliniensis
CD36_08580
N
0.000
CLUG_05051
Candida lusitaniae
CLUG_05051
N
0.000
CLUG_05051
Clavispora lusitaniae
CLUG_05051
N
0.000
CORT_0G01040
Candida orthopsilosis
CORT_0G01040
N
0.000
CTRG_03264
Candida tropicalis
CTRG_03264
N
0.000
DEHA2A03520g
Debaryomyces hansenii
DEHA2A03520g
N
0.000
fgenesh1_pg.C_chr_3.1000414
Pichia stipitis
fgenesh1_pg.C_chr_3.1000414
N
0.000
G210_5450
Candida maltosa
G210_5450
N
0.000
GNLVRS01_PISO0I05530g
Millerozyma farinosa
GNLVRS01_PISO0I05530g
N
0.000
GNLVRS01_PISO0J07335g
Millerozyma farinosa
GNLVRS01_PISO0J07335g
N
0.000
HPODL_00099
Ogataea parapolymorpha
HPODL_00099
N
0.000
LELG_03589
Lodderomyces elongisporus
LELG_03589
N
0.000
PICST_30827
Scheffersomyces stipitis
PICST_30827
N
0.000
SPAPADRAFT_55840
Spathaspora passalidarum
SPAPADRAFT_55840
N
0.000